| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4170 |
|---|
| Symbol | |
|---|
| ID | 4475911 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008573 |
|---|
| Strand | + |
|---|
| Start bp | 35699 |
|---|
| End bp | 36355 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639720528 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_863686 |
|---|
| Protein GI | 117676110 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0600778 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAATG AAGGCTGGTT AGCCGTAATT AGTTTAGGGG TAACCTTAAC GTTATTATCG
CTATTGCGCG ACAGGTTATT TTCCACCATT GGGCGTGGTT TGTTGTTTCG TCTTTATGCG
GCCCCGGGTG TATTTGTCCA TGAACTCAGT CATGCTCTTA CTGCAATTCT GTTTCGGTTT
ACCATTACCA AAATATCCTT TTTCTCACCA CAGCCTGACG GCACACTTGG CTTTGTGCAG
TACCAGTACC GACCATCATT AATTAGCCCT GTGTTACGTT TATTCGTCGG AATAGCCCCG
CTTTTCGGCG GATGTGCTGT TGTGTGCATA CTTAATTGGT TATTCCAGGC GCCAGCCACC
ATTGACTGGT CTGCACTTTA TAATTTCGCC GTTGATGAAC CGTTGCGGTT TGGAATCTGG
ATGTATTTCA CTTCTTCAGT CGTGGCTAAT GCCGTTCCAA GCAAGTTTGA TTTGAATAAC
AGCTATATTG CTCTGTACTG TCTGTGTTTT GTGATTGGAA CCCTGCCGCT CAGTTACACC
CCTCTTTTGA ATTTGCTCAG CTCTATCATG GCACTGTGCT TATTGGTAGT GTTACTCTTT
GTAGTAGTGT TATCTGGGGT ATATTTCTGG CGACAACTTT CAAACATTAA CATTTAA
|
|---|
| Protein sequence | MANEGWLAVI SLGVTLTLLS LLRDRLFSTI GRGLLFRLYA APGVFVHELS HALTAILFRF
TITKISFFSP QPDGTLGFVQ YQYRPSLISP VLRLFVGIAP LFGGCAVVCI LNWLFQAPAT
IDWSALYNFA VDEPLRFGIW MYFTSSVVAN AVPSKFDLNN SYIALYCLCF VIGTLPLSYT
PLLNLLSSIM ALCLLVVLLF VVVLSGVYFW RQLSNINI
|
|---|
| |