| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4156 |
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| Symbol | |
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| ID | 4475932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008573 |
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| Strand | - |
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| Start bp | 17444 |
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| End bp | 18784 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639720514 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_863672 |
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| Protein GI | 117676096 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.283296 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTATCAA TACGTACTGC GCCGGGTTCT GGCGCTTTGG GGCGGAGGAA TATCAAAAGC
CGATGTATTC TGTTCAGTTT ATTATTTTTC ATTTCTTCGT CGGGGCTTAG CGCCGAGCCT
GGGGACTCAA CGATCACGCT GACCAATGCG GTGCAGCGCG CCTTGTCACA AAACCCGTCT
TTGAAAGTTT TTCCCTACCG CTACGCAGCC CTTCAAGGGC AGGCCGAAAC AGCCGGGTTA
AGACCGGCGT ATGAGCTGGG ATTTGACGCT GAAAATGTCG GGGGCACTGG GGACTTCAGC
GGCGCAAGTG GTGCTGAACT CACCATTGCG CTGTCTTCGG TCATCGAAAT GGGGGATAAG
CGCGCGGCAC GGCAAGGCGT AATCTCCCAC AGTCGGTCGG TGCTCAATGC CAGCCGACAG
GTGGAATCCT TGGCCTTATT GGGCGAAGTC ACCCGCCGTT ACGTCGATGT GCTAGCGGCA
CAGGAGCAGG TCACCCTGGC TGGCGAGGCC GCCCAGTTGG CGAGCGAGAG CTTACGCATT
GTGAAAAAGC GGGCTACGGC GGGAGCGACA CCCGAGGCGG AAGTCAAACG GGCACAGGCC
GCTGCCGAGC AAGCGAAGCT CGCTTTGCTT TCGGAGCAGC AACGGCTTGC TTATTTGAAA
GTGTCGTTGT CTGCCCTGTG GGGGGTAACC TCACCGGACT TTGACAAAGT GGAAGGTGAT
CTATTCCAGT TTGGCGAGGA CGTGGCATTC GACCTGTTGT ACGCCAAAGT TGAAAAAAAT
CCTGCGATAG AAGTATTCGC AGCAGAGTCC CGCCTCAAAG AAGCAGAAAT ACGCCTTGCT
CAAACCCAAT CCAGTGCCGA TATCAGTTGG TCGGTGGGGG TTCGTCGCTT GCAGGAAACC
GATGACACCG CGTTGGTAGC GGGTTTCAGC ATGCCGTTGT TTTCCGGCAA GCGAAATGTC
GGCGCCGTTT CGACCGCGTT GGCCGAAAAA AATCAGGTGT TGGCAGAGCG CGATGTAATG
CTGCTGGATC TACACACGCA ACTGTTCCGG GCTTTTCACA ACCGCAAACA AGCCATTGTC
GCGGTAGAGG CACTGCGCAC CGCCATCATT CCCGCCCTTG AGCAGGCCCT GGTAGAAACT
CAGGCGGCCT ATCAACGCGG TCGCTACGGG TATCTCGACT ATGTCAGCGC GCGGCAGGAA
TTATTGAGCG CCAGGCGCAC CCAGATCGAA GCGGCCGCAG CCGCCTTAAC CTATGGTGCA
GAAATTGAGC AGCTAACAGC AGAGCCCTTG GCCTTGACAC AGTATGGCGA AGACAACACA
TTTTCAGGAA CCCCACAATG A
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| Protein sequence | MLSIRTAPGS GALGRRNIKS RCILFSLLFF ISSSGLSAEP GDSTITLTNA VQRALSQNPS
LKVFPYRYAA LQGQAETAGL RPAYELGFDA ENVGGTGDFS GASGAELTIA LSSVIEMGDK
RAARQGVISH SRSVLNASRQ VESLALLGEV TRRYVDVLAA QEQVTLAGEA AQLASESLRI
VKKRATAGAT PEAEVKRAQA AAEQAKLALL SEQQRLAYLK VSLSALWGVT SPDFDKVEGD
LFQFGEDVAF DLLYAKVEKN PAIEVFAAES RLKEAEIRLA QTQSSADISW SVGVRRLQET
DDTALVAGFS MPLFSGKRNV GAVSTALAEK NQVLAERDVM LLDLHTQLFR AFHNRKQAIV
AVEALRTAII PALEQALVET QAAYQRGRYG YLDYVSARQE LLSARRTQIE AAAAALTYGA
EIEQLTAEPL ALTQYGEDNT FSGTPQ
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