| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4154 |
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| Symbol | |
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| ID | 4475930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008573 |
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| Strand | - |
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| Start bp | 13291 |
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| End bp | 16431 |
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| Gene Length | 3141 bp |
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| Protein Length | 1046 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639720512 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | YP_863670 |
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| Protein GI | 117676094 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.36883 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGATA AACTCATTCA ATTTTCCATC GCACGCCGCT GGCTGGTGAT GTTTCTGGTG
CTGGTAACGG GCGCCCTGGG TGTCTGGAAC TATCAGCAGC TACCCATTGA CGCGGTACCC
GATATCACCA ATGTCCAGGT GCAAATCAAT ACAGAAGCCC CAGGCTACTC ACCGCTGGAA
GTGGAGCAAC GCATTACCTA CCTGGTAGAA CTGGCGATCA CGGGGTTGCC CTATGTTGAG
AGTACCCGTT CGATATCACG CTATGCCCTG TCTCAGGTGA CCGTGGTGTT TGAAAAAGGC
ACGGACATTT ACTTTGCCCG CAATCTTATC AACGAGCGCT TGCAGCAGGC GAAAAGCGAG
ATGCCTTCGG GAATCGATCC GGCGATGGGA CCCGTTGCCA CAGGCCTCGG TGAAATCTTT
CACTATGCGG TGCATGCGAA ACCGGGCGCC TTGATGGAAA ATGGTGAGCC GTATGATGCG
ACGGCCTTAC GCACCTTGCA GGATTGGGTG ATACGTCCGC AATTGCGCCT GGTTCCAGGT
GTTACCGAAG TCAATACCAT TGGCGGCTTT GAAAAGCAGT TCCACGTCAC CCCGGAACCG
TCAAAACTGC TGGCCTACCA GCTCAGCTTC GACGATCTGG TGGCGGCATT GGAGAAAAAC
AACGCCAACA TCGGTGCCGG ATATATCGAA AAAAATGGCG AACAATACCT GATTCGTGCC
CCCGGACAGG TAGCTGACAT CCCGGCGATC GAAAAAATCA TCGTCGCTCG TCGAGCCGGG
TTACCCATTA CCGTGGCTGA TGTGGCCGAG GTCGGATTCG GCAAAGAGTT GCGCACAGGT
GCCGCTACTC GCGATGGTGA GGAGACTGTA TTGGGTACCG CCGTCATGCT GCTGGGAGGT
AATAGTCGGA CGGTTTCCCA GGATGTGTCG GCCAAGTTGT TGGAGATCAA TAAGACGCTG
CCCGAGGGCG TGATTGCCGA ACCGGTTTAT AACCGTACGG TACTGGTCGA TAAAACCATT
GCCACGGTGC AGGCCAACCT GGCCGAAGGT GCGGTATTGG TTGTCGTCGT GCTCCTGATC
ATGCTCGGCA ACGTCCGGGC GGCCTTACTC ACCGCAATGG TGATTCCATT GTCGATGTTG
ATGTTGATGA CGGGCATGGT GCAAACCAAG GTCAGCGCCA ATCTGATGAG TTTGGGCGCA
CTCGATTTTG GCTTGATTGT GGATGGTGCG GTGATCATTG TCGAAAACTG TATCATGCGC
TTGGCTGGGC GACAGCATCA TCTTGGGCGC ACCTTAAAAC TGGATGAGCG TTTTCAAACG
GTGTTTGCGG CCACCCGCGA GGTTTTTGCG CCGAGTTTGA TCAGCGTGTT AGTGGTGATT
CTGGTGAACT TACCCATCCT GGCTTTGACG GGCGTGGAAG GCAAAATGTT TACGCCCATG
GCTATGGCGG TGATCATGGC CTTGCTGTCT GCGTTGGTGC TGTCACTCAC CTTCGTCCCT
GCCGCCGTGG CGCTGTTTAT GACGGGGCAT ATCGAGGAGA AGGACAATTT TATTGTTCGC
CACTCCAAAC GGTTTTACGC CCCGGTTTTG GCGTGGGCGC TAAAGTTTCG CGTTCTCGTA
TTGTCTGCGG CCCTGATCTT TGTGGTTTTG GTCGGCGCAC TGGCCACGCG GATGGGGACG
GAATTTATCC CTAATCTGGA TGAGGGCGAT ATTGCCGTCC AGGCACTGCG AATACCCGGC
ACCAGTCTCA CTCAATCCCT GGATATGCAG TTTCAACTGG AAAAAGCGGT TCTGGAAATC
CCTGAAGTCA AAACCTACTT CGCGCGCGTC GGCACGGCCG AAGTTGCCAG TGACCCCATG
GGGCCCAACA TTTCCGATGG CTATGTCATG CTCAGGGATC GCAGTGAATG GCCCGATCCT
GATAAAACCA AAGCGCAGCT GTTGGAAGAA ATTGGTGAGA AACTGACGTT GTTGCCGGGA
AATGCCTATG AGATCAGCCA GCCGATCCAA CTGCGCTTCA ATGAATTGAT TTCTGGTGTG
CGATCAGACC TCGGGATCAA GGTGTTCGGC GATGATTTGG ACCAGCTGCT TAAATCGGGC
AGCGAAATCG CGGCGGTATT GACTGGCATC GAGGGCGCCG AAGGTGTCAA GGTCGAACAG
GTATCCGGTT TGCCTATTCT GTCCATTAAT GCTGATCGTT CAGCTATGTA TCGTTATGGC
TTGAATGTCG CCGATGTGCA GGACGTAGTC GCCGCCGCCA CGGGCGGTGA GGAGGCTGGC
CTGATCTTTG AAGGCGATCA ACGTTTCTCG ATAGTGGTGC GAGTGGCCGA GGGCATAAGG
GGCGACTTGC GCGCGTTGGA ACGTTTGCCG ATACCGCTGC CAGAGGGCGG CTACGTACCG
CTGCGGGAAG TGGCCAGTCT CACGCTGGCC CCTGGACCTA ATCAGATCTC TCGCGAAAAC
GGCAAGCGGC GACTGGTTGT CAGCGCGAAC GTTCGCGGTC GTGATTTGGG TGGTTTTGTG
GCTGAAGTTC AGGGCAAAGT TGCGCAACAG GTGAAATTGC CGCCCGGCTA TTGGCTGGAG
TATGGAGGCA CCTTTGAGCA ACTGCAATCG GCCTCGCAGC GGTTAAGCCT GCTTGTCCCC
GTCACTTTGG TGATGATTTT TGCACTGTTG ATGATGACCT TTGGTTCGGC AAAAGATGCG
GCATTGGTCT TCAGTGGCGT ACCGCTGGCG CTGACCGGTG GCGTTATCGC CTTGTGGTTA
AGAGATATTC CCCTCTCGAT CACAGCCGGC GTTGGGTTTA TTACCTTATG CGGGGTTTCT
GTACTGACGG GGGTCATGAT GGTGTCGGCC TTTCGAGATG AGCTCAATCG GGGTGAATCC
GTCGAGCAGG CGATTCAGGG CGGCGCCATG TTGAGATTGC GGCCGATTTT GATGGTCGCT
CTGGTGGCTG CATTAGGCTT CTTGCCGATG GCACTCAACA CCAGCACTGG AGCAGAAGTC
CAAAGACCAC TGGCCACGGT AGTCATCGGC GGCATTATCT CATCCACGTT ACTCACTCTA
TTGGTACTTC CCGGCCTTTA TCGACTGGCT TGGCGAAAGC CAAAAGAGAT TGATGACAAC
GGCGTTCCGA TCGCTCAGTG A
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| Protein sequence | MIDKLIQFSI ARRWLVMFLV LVTGALGVWN YQQLPIDAVP DITNVQVQIN TEAPGYSPLE
VEQRITYLVE LAITGLPYVE STRSISRYAL SQVTVVFEKG TDIYFARNLI NERLQQAKSE
MPSGIDPAMG PVATGLGEIF HYAVHAKPGA LMENGEPYDA TALRTLQDWV IRPQLRLVPG
VTEVNTIGGF EKQFHVTPEP SKLLAYQLSF DDLVAALEKN NANIGAGYIE KNGEQYLIRA
PGQVADIPAI EKIIVARRAG LPITVADVAE VGFGKELRTG AATRDGEETV LGTAVMLLGG
NSRTVSQDVS AKLLEINKTL PEGVIAEPVY NRTVLVDKTI ATVQANLAEG AVLVVVVLLI
MLGNVRAALL TAMVIPLSML MLMTGMVQTK VSANLMSLGA LDFGLIVDGA VIIVENCIMR
LAGRQHHLGR TLKLDERFQT VFAATREVFA PSLISVLVVI LVNLPILALT GVEGKMFTPM
AMAVIMALLS ALVLSLTFVP AAVALFMTGH IEEKDNFIVR HSKRFYAPVL AWALKFRVLV
LSAALIFVVL VGALATRMGT EFIPNLDEGD IAVQALRIPG TSLTQSLDMQ FQLEKAVLEI
PEVKTYFARV GTAEVASDPM GPNISDGYVM LRDRSEWPDP DKTKAQLLEE IGEKLTLLPG
NAYEISQPIQ LRFNELISGV RSDLGIKVFG DDLDQLLKSG SEIAAVLTGI EGAEGVKVEQ
VSGLPILSIN ADRSAMYRYG LNVADVQDVV AAATGGEEAG LIFEGDQRFS IVVRVAEGIR
GDLRALERLP IPLPEGGYVP LREVASLTLA PGPNQISREN GKRRLVVSAN VRGRDLGGFV
AEVQGKVAQQ VKLPPGYWLE YGGTFEQLQS ASQRLSLLVP VTLVMIFALL MMTFGSAKDA
ALVFSGVPLA LTGGVIALWL RDIPLSITAG VGFITLCGVS VLTGVMMVSA FRDELNRGES
VEQAIQGGAM LRLRPILMVA LVAALGFLPM ALNTSTGAEV QRPLATVVIG GIISSTLLTL
LVLPGLYRLA WRKPKEIDDN GVPIAQ
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