Gene Shewana3_4140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4140 
Symbol 
ID4475934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand
Start bp278592 
End bp885 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content
IMG OID639720498 
Producthypothetical protein 
Protein accessionYP_863656 
Protein GI117676080 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.813287 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.597426 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAAGAAC TCATTGATAA GTATAAATCA GACGAAGAAT CGGTCTACAA CACTTGGTAT 
ATCAATAGTC AAGAACGATT AAAAGCCTTC CGCTCTATTC GTCGAGGAGT CTTAAACGTT
ATCGAAAAAA TAAAAACTAA AAACTTTGGG AATGATTTCA AAGATTCTTC TCTTGAATTT
GTCCTTAATT GCATTACAGA ACAAAAGCAG GTTTTCATTG GTGCAGCCCA TGCGTTTTAC
TGGAAACCAA AACTTAGAAT TCCGGATATT TATGAAAATG AAAACAATCA ACTTATATTT
GGTCAATTCC TTGAGCGCTG CTTTAACGCC AAGAGTGAAG AGCAGCTTTT GAAAGAGATC
ATTCTTCTTG AACAAAACAA AATTAAAGGT CTTGGTCCAG CAGTGGCAAA TATTCTTTAT
TTTCTTCATC CAGAAATCAT GCCTCCCTTT AATACTGTAA TAGTTAATGG ATTTAACCAA
TTGTTCAAAG AAAAGATTAA ACTTGGTTCG TGGAGTGAAT ATCTTAGAAT GCGTGAGATC
ATTCTAGAAA AAAATGTTCA GTTTAAGCAA GAATTTTCCA AAGATCTCGG TGCAATCGCT
GGGTTTCTTT TCGAAATAGG TTCGAAAAAA ATCATCGTTA GTGATGATGC TTCGTTATCA
GAAAAAGAAT TATTGAAAAT CCAACAATCG CTTAAAAAAA GACATAATGA AGTCATGGGA
GACAAAGAAG AAGAGGATCT TCACACCGAA ATGCAATATC ACCTGTTGCG AATAGGTCAG
CAACTCGGTT ATGAAGTAAT TAGTGCCTCG AATGATCGTG CTCGTTGTCA TAATGGAAAC
AACTTTTCTT TCATTAGTCT TAATCAGTTT CCAGATATTG GCCTTBio ::Seq ::RichS
eq =HASH (0x86af4e0 )
 
Protein sequence
MQELIDKYKS DEESVYNTWY INSQERLKAF RSIRRGVLNV IEKIKTKNFG NDFKDSSLEF 
VLNCITEQKQ VFIGAAHAFY WKPKLRIPDI YENENNQLIF GQFLERCFNA KSEEQLLKEI
ILLEQNKIKG LGPAVANILY FLHPEIMPPF NTVIVNGFNQ LFKEKIKLGS WSEYLRMREI
ILEKNVQFKQ EFSKDLGAIA GFLFEIGSKK IIVSDDASLS EKELLKIQQS LKKRHNEVMG
DKEEEDLHTE MQYHLLRIGQ QLGYEVISAS NDRARCHNGN NFSFISLNQF PDIGLAKETR
KTIELIDVVW FEKGTNKITG AFEVEKSTSI YSGILRLTDL HLSFPEEQAS LFIIIPDNRE
KDLLFQLNRP AITGSKVPVK YILFSDLRKH CDAICTFGER KEALYKISKN A