Gene Sfum_4100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_4100 
Symbol 
ID4457556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4985625 
End bp4986398 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content55% 
IMG OID639704870 
Producthypothetical protein 
Protein accessionYP_848200 
Protein GI116751513 
COG category[S] Function unknown 
COG ID[COG1469] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00294] conserved hypothetical protein TIGR00294 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.435749 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGACG TACAGAGCCG ATTCGATAGC CGCAACATCA GGGTGGACAA GGTGGGTGTC 
AAGGACATCC GTTATCCGAT CACCGTGATG GACAAGACCA ACGGGATCCA GCACACGGTG
GCGTCCGTCA ATATGTACGT GAATCTTCCG CGTGAATTCA AAGGGACTCA CATGAGCCGA
TTCATTGAAA TCCTCAACGA ATTCCACGGA AACCTTGACA TCCGGGAGTT TCCGTCCATA
CTGCAATCCG TCCAGGAGCA CCTGAGCGCC GAATCCGCTC ACCTGGAGCT CAGTTTCTCC
TACTTCATCA AGAAGCTGTC TCCGGTTACG GGCTGTGCCG GGCTGATGGA ATACGGCTGT
CGGGTGGCCG GCTCCCTGGA CTCCAATCGT GGGCATGATC TGGTCCTGGA AGTCAACGTG
CCGATTTCCA CGGTCTGCCC CTGTTCGAAG GAAATCAGCA GCTACGGCGC CCACAATCAG
AGGGGGATGG TCCGACTGGC GGTGCGGTTC AAGAAATTCG TCTGGATTGA AGACCTGGTG
AGGCTGGTGG AGTGCGCGGC GTCATCGGAA GTTTACTCCG TGCTGAAACG GCCCGACGAA
AAATTCGTGA CGGAAAGCGC TTTCGACAAC CCCAAATTCG TCGAGGACGT GGTGCGCGAC
ATCGCCAAGG AGCTCAAGGC AGACCAGAAC ATCAGCTGGT TCCTGGTGGA TGTGGAGAAT
TTCGAATCGA TACACAATCA CAGCGCTTAC GCGTGCATCG AGCGCAGCAA ATGA
 
Protein sequence
MIDVQSRFDS RNIRVDKVGV KDIRYPITVM DKTNGIQHTV ASVNMYVNLP REFKGTHMSR 
FIEILNEFHG NLDIREFPSI LQSVQEHLSA ESAHLELSFS YFIKKLSPVT GCAGLMEYGC
RVAGSLDSNR GHDLVLEVNV PISTVCPCSK EISSYGAHNQ RGMVRLAVRF KKFVWIEDLV
RLVECAASSE VYSVLKRPDE KFVTESAFDN PKFVEDVVRD IAKELKADQN ISWFLVDVEN
FESIHNHSAY ACIERSK