Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_4100 |
Symbol | |
ID | 4457556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 4985625 |
End bp | 4986398 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639704870 |
Product | hypothetical protein |
Protein accession | YP_848200 |
Protein GI | 116751513 |
COG category | [S] Function unknown |
COG ID | [COG1469] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00294] conserved hypothetical protein TIGR00294 |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.435749 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAGACG TACAGAGCCG ATTCGATAGC CGCAACATCA GGGTGGACAA GGTGGGTGTC AAGGACATCC GTTATCCGAT CACCGTGATG GACAAGACCA ACGGGATCCA GCACACGGTG GCGTCCGTCA ATATGTACGT GAATCTTCCG CGTGAATTCA AAGGGACTCA CATGAGCCGA TTCATTGAAA TCCTCAACGA ATTCCACGGA AACCTTGACA TCCGGGAGTT TCCGTCCATA CTGCAATCCG TCCAGGAGCA CCTGAGCGCC GAATCCGCTC ACCTGGAGCT CAGTTTCTCC TACTTCATCA AGAAGCTGTC TCCGGTTACG GGCTGTGCCG GGCTGATGGA ATACGGCTGT CGGGTGGCCG GCTCCCTGGA CTCCAATCGT GGGCATGATC TGGTCCTGGA AGTCAACGTG CCGATTTCCA CGGTCTGCCC CTGTTCGAAG GAAATCAGCA GCTACGGCGC CCACAATCAG AGGGGGATGG TCCGACTGGC GGTGCGGTTC AAGAAATTCG TCTGGATTGA AGACCTGGTG AGGCTGGTGG AGTGCGCGGC GTCATCGGAA GTTTACTCCG TGCTGAAACG GCCCGACGAA AAATTCGTGA CGGAAAGCGC TTTCGACAAC CCCAAATTCG TCGAGGACGT GGTGCGCGAC ATCGCCAAGG AGCTCAAGGC AGACCAGAAC ATCAGCTGGT TCCTGGTGGA TGTGGAGAAT TTCGAATCGA TACACAATCA CAGCGCTTAC GCGTGCATCG AGCGCAGCAA ATGA
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Protein sequence | MIDVQSRFDS RNIRVDKVGV KDIRYPITVM DKTNGIQHTV ASVNMYVNLP REFKGTHMSR FIEILNEFHG NLDIREFPSI LQSVQEHLSA ESAHLELSFS YFIKKLSPVT GCAGLMEYGC RVAGSLDSNR GHDLVLEVNV PISTVCPCSK EISSYGAHNQ RGMVRLAVRF KKFVWIEDLV RLVECAASSE VYSVLKRPDE KFVTESAFDN PKFVEDVVRD IAKELKADQN ISWFLVDVEN FESIHNHSAY ACIERSK
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