Gene Sfum_4095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_4095 
Symbol 
ID4457551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4981242 
End bp4982909 
Gene Length1668 bp 
Protein Length555 aa 
Translation table11 
GC content63% 
IMG OID639704865 
Productfumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 
Protein accessionYP_848195 
Protein GI116751508 
COG category[C] Energy production and conversion 
COG ID[COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.711821 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTACA CTCCGGAAAT GAAAGAATTG ATCAAACGGG TTGAGGCAAC GCGGCCGGCG 
CGCGTGGAAA GAGCCCGACG CGGAGAGAAT TTCCCGGCAT TGAGCCTGGA AGAGCGTGCC
GTGGTGCTGG AGAAGTTCCA TCCCGACTAC CAGAAGGAGG GCCGCCGCGC GGTGCGGGTC
GGACGGGACA AGGGGCTGGT TCTCCCGGAC GAAATCGCCA CAATGCTGGA ATCACGCTCC
ATGCTGCGCC CCGACAAGGT GGACCTCACC AAGATCGATT TCGACACCGA CGTGCTCATC
GTGGGCGCGG GGGGAGGCGG TTCTTCCGCG GCGCTTCTCG CTTCCAATTC CGGCCTCAAG
GTCATCATGG CCACCAAGCT CCGTCACGGC GACGCCAACA CGATGATGGC CGAAGGCGGC
ATCCAGGCGG CCACCCAGGA ATGTGATTCC CCCTTCTATC ATTACCTGGA CACCATAGGC
GGCGGTCATT TCACCAATCA GCCCGACCTG GTCGCGGCCC TCGCCCATGA CGCACCGCTC
TCCATCGCCT GGCTGGAATC CCTGGGCATG ATCTTCAACA AGCTTCCCGA CGGACGGCTC
GACGCACGGC ACTTCGGCGG CTCCTCCCGC AAACGCATGA ATTCCTCCGG CGACATGACC
GGAGCTGAAA TCATGCGCGT GCTGAGAGAC GAGGTGAGGA ACCGTCGCGA CCGAATCACG
GTGCTCGAAT TCTGTCCCGC CGTGGAACTG CTCCTGGATG AAACCGGAAA GTGCGCGGGC
GCCATCCTCT ACAACATGGA AACCCGGGAA TTCTTCATTG CGCGCGCCAA GGCCGTGGTG
ATCGCCACCG GCGGCAACGG GCGTCTCCAC ATCAAAGGCT TTGCCACCAC GAACCATTAC
GGCGCAACCA TGGACGGCGT GGTCATGTGC TACCGGGCCG GGGTGGGCAC CACCTGCCTG
CCTTCGACCC AGTATCATCC CACGGGCGTG GCCTACCCGG AGCAGAACGT CGGCCTGCTC
ATCACCGAAA AGGTCCGCGG CCTGGGCGCA CACGTCCTCA ACAACGAAGG CGAGCAGTTC
TGCTTCCCCC TCGAGCCGCG CGACGTCGAA TCCGCCGAGC TGATCAAGGA AGCCGTCGAA
GTGCAGAAAG CCGTGCTCAC GCCCACCGGT CGCTACGGCC TCTGGCTGGA CTCGCCCATG
ATCGACCTGC TGCACGGCGA AGGCACGGTC CGCAGGGAAC TGCCTGCAAA GTTCATCCAG
TTCGCGCGGC ACGGCATCGA CATCAGCAAG GAACCGATGC TGGTCTACCC GACCCTGCAC
TACCAGAACG GCGGCATTGC CATCAACGCC GACTGCGAAA CCGTCATCCC GGGTCTTTAC
AGCGCCGGCG AGTGCACGGG CGGCGTCCAC GGCGAAAACC GCCTCATGGG GAACAGCCTG
CAGGACGTCA TCACCTTCGG CCGCCGGGCG GGCGTCAGTG CCGCCGCATA CGTGAAAAAG
GGCGTCGAGC TCAAGAAGCT GACGCTGGAC CACGTGGCCG GGTACGAAAA GGAACTGGCC
GAGGCGGGAA TCGACAACCC GATGGTTGCC CCGATCCTGC TGCCCGACTA CGCCACCGAC
GAGGTTGCGA GCCGCAGGAT GGCCGAAGCG ATTCAGGAAG CCGAATAG
 
Protein sequence
MGYTPEMKEL IKRVEATRPA RVERARRGEN FPALSLEERA VVLEKFHPDY QKEGRRAVRV 
GRDKGLVLPD EIATMLESRS MLRPDKVDLT KIDFDTDVLI VGAGGGGSSA ALLASNSGLK
VIMATKLRHG DANTMMAEGG IQAATQECDS PFYHYLDTIG GGHFTNQPDL VAALAHDAPL
SIAWLESLGM IFNKLPDGRL DARHFGGSSR KRMNSSGDMT GAEIMRVLRD EVRNRRDRIT
VLEFCPAVEL LLDETGKCAG AILYNMETRE FFIARAKAVV IATGGNGRLH IKGFATTNHY
GATMDGVVMC YRAGVGTTCL PSTQYHPTGV AYPEQNVGLL ITEKVRGLGA HVLNNEGEQF
CFPLEPRDVE SAELIKEAVE VQKAVLTPTG RYGLWLDSPM IDLLHGEGTV RRELPAKFIQ
FARHGIDISK EPMLVYPTLH YQNGGIAINA DCETVIPGLY SAGECTGGVH GENRLMGNSL
QDVITFGRRA GVSAAAYVKK GVELKKLTLD HVAGYEKELA EAGIDNPMVA PILLPDYATD
EVASRRMAEA IQEAE