Gene Sfum_4080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_4080 
Symbol 
ID4457569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4962568 
End bp4962885 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content60% 
IMG OID639704850 
Producthypothetical protein 
Protein accessionYP_848180 
Protein GI116751493 
COG category[S] Function unknown 
COG ID[COG1872] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00251] conserved hypothetical protein TIGR00251 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.012749 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0309367 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTCTGA TGAAGAGTGG TTCATTTCTG CGTGCGGGCG AGGGGGGAAC TCTCCTGGAC 
GTCTATCTTC AGCCGAGGGC ATCGAAGAAC GAATGGGCGG GGATGCACCA GGGTTGCCTC
AAGATCAGGC TCACCGCGCC TCCGGTGGAA GGCGAGGCGA ACAAGGAGTG CGTGAAATTC
CTCGCCGGGG CGTTCGGAGT CTCCCGGTCC GACGTTGAAA TCATCCGGGG ACACAAATCC
CGCCGCAAGA CGATTCTGAT CCGCAACTCC ACCCCCGAGA TTCTGAGAGC GGTCTTGCTG
GAAACCGGCG TTCTCTGA
 
Protein sequence
MGLMKSGSFL RAGEGGTLLD VYLQPRASKN EWAGMHQGCL KIRLTAPPVE GEANKECVKF 
LAGAFGVSRS DVEIIRGHKS RRKTILIRNS TPEILRAVLL ETGVL