| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_4079 |
|---|
| Symbol | |
|---|
| ID | 4457568 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 4960309 |
|---|
| End bp | 4962045 |
|---|
| Gene Length | 1737 bp |
|---|
| Protein Length | 578 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639704849 |
|---|
| Product | aldehyde ferredoxin oxidoreductase |
|---|
| Protein accession | YP_848179 |
|---|
| Protein GI | 116751492 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2414] Aldehyde:ferredoxin oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.042505 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGA TATTGAGAAT CGACACCGGG GCTGAAGGCG GTCCGCAGGC AACCGTCGGC
TCCCCGGGAG AATACGCCGG ACTTGGAGGA AGGGCTTTGA CATCGACGGT GGTCGCCCGG
GAGGTGCCTC CGTTGTGCCA CCCGCTCAGC GCCGAGAACA AGCTGGTGAT TGCGCCCGGA
CTGCTGAGCG GGACGAGCGG GGCCATGTCG GGCCGAATAT CCATCGGGGC CAAGAGTCCG
CTCACCGGAA CCATCAAGGA ATCCAATGCC GGAGGCCAGC CTTCCCAGGT ATTGGCCCGC
CTGGGATATG CCGCGGTGAT CCTGGAAGGC AAGCCCGCCA CAGACGATCT CTACAAGGTG
GTGATCGACA AGGAGGGGGT CCGGATCGTC CGGGACAACA GCCTCAGGAT GCTGCCCAAC
TACGACCTGA TCGAAAAGAT GAAATCCGAA CACGGGGAGC ACATCGCGTG CATCTCCATC
GGACCGGCCG GTGAGATGAA GCTCGGCGCG GCTTCCATCG CATGCACCGA CACGGAGTTG
AGGCCCACCC GTCACGCGGG GCGAGGGGGT CTTGGAGCCG TTATGGGTTC AAAGGGAATC
AAAGTGATCG TCCTGGACGA TTCCGGGATG AAGACGAGAC AGCCCAAGGA CCCCGACAAA
TTCCACGCGG CCAACAAGAA ATTCGTGGAA GGTCTGCGAA ACCACCCCGT CACCGGGCAG
GGCCTGCCGG CCTACGGAAC GAACGTCCTG ACGAACATCA TCAACGAAGC CGGCGGTTAT
CCCACCTGCA ATTTCCGGCA GGGCCGATTT GAGAAAGCCC ACCAGATCAG CGGCGAGACG
CAGGCCGAGA CCGAAACGGT CCGGGGCGGC CTTGCCACTC ACGGCTGCCA TCGCGGCTGC
GTCATCCGCT GCTCCGGCAT TTACAACGAC AAGGACGGCC GCTATCTGAC CAAGCAACCC
GAATACGAGA CCGTCTGGGC GCACGGCGGG CAGTGCGGCA TCAGCGATCT GGATGCCATC
GCCATGCTCG ATTTTCTGGA CGACAATTAC GGGTTGGACA CCATTGAGAT GGGCGTGGCC
CTGGGAGTGG CCATGGAAGG CGGCCTGCTC AGGTTCGGAG ACGCCGAGGG AGCCGTCAAT
CTGGTCAAGG AAGTCGGCAA GGGAACGCCC CTCGGCCGGA TTCTCGGCAG TGGAGCGGAG
ATCACCGGCA AGGCCTTCGG AGTCGCCAGG ATCCCGGTCG TGAAGGGTCA GGCCCTGCCC
GCCTACGACC CGAGGGCGGT TCAGGGGATC GGCGTGACCT ACGCCACCTC CACCATGGGG
GCCGATCATA CCGCCGGGTA TGCGGTCGCC ACGAATATTC TGAAGGTGGG CGGCGACGTC
GATCCATTGA AACCCGAAGG GCAGATCGAG TTGTCTCGCA ATCTCCAGAT CGCAACCGCG
GCCGTCGATT CCACCGGGAT GTGCCTGTTC ATCGCGTTTG CCGTTCTCGA CCAGCCCGAT
ACGTTCCAGG CGCTGATCGA CATGATCAAT GCGTTCTACG GGCTGCAGAT GACGGCCGAC
GACGTCGTGG CGCTCGGCAA GCAGGTGTTG AAGACGGAAC GGGACTTCAA CGCCCGGGCC
GGGTTCACCG CCCAGCATGA CAGGCTGCCG CGCTTCTTCA AGACGGAACC GGTCGGGCCT
CACAATGTGA CTTTCTCGGT CCCTGACGAA GAACTGGACA GAGTGCACGA CTACTAG
|
|---|
| Protein sequence | MNKILRIDTG AEGGPQATVG SPGEYAGLGG RALTSTVVAR EVPPLCHPLS AENKLVIAPG
LLSGTSGAMS GRISIGAKSP LTGTIKESNA GGQPSQVLAR LGYAAVILEG KPATDDLYKV
VIDKEGVRIV RDNSLRMLPN YDLIEKMKSE HGEHIACISI GPAGEMKLGA ASIACTDTEL
RPTRHAGRGG LGAVMGSKGI KVIVLDDSGM KTRQPKDPDK FHAANKKFVE GLRNHPVTGQ
GLPAYGTNVL TNIINEAGGY PTCNFRQGRF EKAHQISGET QAETETVRGG LATHGCHRGC
VIRCSGIYND KDGRYLTKQP EYETVWAHGG QCGISDLDAI AMLDFLDDNY GLDTIEMGVA
LGVAMEGGLL RFGDAEGAVN LVKEVGKGTP LGRILGSGAE ITGKAFGVAR IPVVKGQALP
AYDPRAVQGI GVTYATSTMG ADHTAGYAVA TNILKVGGDV DPLKPEGQIE LSRNLQIATA
AVDSTGMCLF IAFAVLDQPD TFQALIDMIN AFYGLQMTAD DVVALGKQVL KTERDFNARA
GFTAQHDRLP RFFKTEPVGP HNVTFSVPDE ELDRVHDY
|
|---|
| |