| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_4077 |
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| Symbol | |
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| ID | 4457566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 4958487 |
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| End bp | 4959272 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639704847 |
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| Product | sugar fermentation stimulation protein |
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| Protein accession | YP_848177 |
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| Protein GI | 116751490 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1489] DNA-binding protein, stimulates sugar fermentation |
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| TIGRFAM ID | [TIGR00230] sugar fermentation stimulation protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0305359 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGATT CCGCGAAGCC GCAGAACCCC GATCCCGGGC ATGAGAGCCG CCGCGTGGCC
CCGCTCGCGG GTTCGCCGAG ATCCCCGTTC CTGATCGAAT TCCCGGAGGA CAGTTTCACC
GCCGTTTTCC TGGGGCGGGA AAAACGTTTC CTTGTCGAGG CCGAACGAAA CGGACACCTG
TTTCAGGCAC ACTGCAACAA TTCCGGGAGC ATGCTCGGCC TGCTGCGGCC GGGAAGCGAC
ATCCTGCTTT CCGTATCCCC CAACCCCTCG CGTCGACTGC CCTACACGCT CGAATCCATC
AAGCTCGGAA GCCACTGGGT GGGAGTGAAC ACGCTCGTAC CCAACCGGAT CCTCAGGCTC
GCCTGGGACA GGGGAATACT GCCGGAGTTG ATAGGTTACG ATCGATTTCA GAACGAAAAA
ACCTCCGGCG AGAGCCGTCT GGACGCCTTT GCGGAAGGAC CCGCGGGGCA GGTCTGGATC
GAGGCGAAAA ACGTGACGCT GGTGGAGGAC GACGTCGCCT GTTTCCCGGA TGCGGTGACC
GTACGCGGGC AAAAACACAT GAGGGAACTG ACGGCGCTGG CGCGCGCGGG CCGGAGGGCC
GCCTGCTTCT TCCTGGTCCA GCGACCGGAT GCTTCGTGCT TCGCTCCCGC CGATTTCATC
GACCCGGTTT ATGCCGAGCT TTTTCACGCA GCAGTGCATG CGGGCGTGGA GATCTGGCCG
TACGAGGCGG TTGTCACCCG GCAGGGGATT GCTCTGGGCC GCAGGCTGAA AGTGGTGGGG
CACTGA
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| Protein sequence | MTDSAKPQNP DPGHESRRVA PLAGSPRSPF LIEFPEDSFT AVFLGREKRF LVEAERNGHL
FQAHCNNSGS MLGLLRPGSD ILLSVSPNPS RRLPYTLESI KLGSHWVGVN TLVPNRILRL
AWDRGILPEL IGYDRFQNEK TSGESRLDAF AEGPAGQVWI EAKNVTLVED DVACFPDAVT
VRGQKHMREL TALARAGRRA ACFFLVQRPD ASCFAPADFI DPVYAELFHA AVHAGVEIWP
YEAVVTRQGI ALGRRLKVVG H
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