Gene Sfum_4076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_4076 
Symbol 
ID4457565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4957702 
End bp4958319 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content65% 
IMG OID639704846 
Productpyruvate ferredoxin/flavodoxin oxidoreductase 
Protein accessionYP_848176 
Protein GI116751489 
COG category[C] Energy production and conversion 
COG ID[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit 
TIGRFAM ID[TIGR03334] indolepyruvate ferredoxin oxidoreductase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0286119 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACTG AAAAGAGGGG CCTGGAGGCC GTGCGCATAT TTTTCACGGG AGTCGGCGGA 
CAGGGAACGC TCCTGGCGAC TCGTCTTGTC GGTGAAGCGG CGTTGGAGGA AGGGCTGCCG
GTCATGATGA GCGAGATTCA CGGCATGGCC CAGCGCGGGG GCGTCGTGGA GTCGTCCGTG
GTCATGGGTA AGGTTTTCAG CCCCACCATC GCCGACGGGG AAGCCGATAT CGTACTGGCG
TTCGAACCGC TGGAGGCGGC GCGGGCACTG CCCAAGTGCC ACCAGGAGAG CATCGTCATC
TCCAGCACGG TTCCCGTGCT GCCCTTCACG GTGGCAACCG GCCAGGCCGT GTATCCCGAG
CTGGAAACGC TCTACGGAGA AGTCCGGGAG AAAGTCGCCC GGTTCATCAA GGTGGATACC
CGCGAAATCG CGCGCCGGGC GGGATCGGAG CGCGCGGCCA ATCTCGCCAT GGTGGGCGTC
CTGGCCGGGA CCGGTCAGCT TCCGATCTCC GGGCGGAGCT GGGATGCGGC CATCAGGAAA
ACGATCCCGG CCCGATTGAT CGACGTCAAC CGGAAAGCCT TCGATTTGGG CTTCGAGGCC
GGCGGCGGCT CCCTGTAG
 
Protein sequence
MATEKRGLEA VRIFFTGVGG QGTLLATRLV GEAALEEGLP VMMSEIHGMA QRGGVVESSV 
VMGKVFSPTI ADGEADIVLA FEPLEAARAL PKCHQESIVI SSTVPVLPFT VATGQAVYPE
LETLYGEVRE KVARFIKVDT REIARRAGSE RAANLAMVGV LAGTGQLPIS GRSWDAAIRK
TIPARLIDVN RKAFDLGFEA GGGSL