Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_4075 |
Symbol | |
ID | 4457564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 4955822 |
End bp | 4957702 |
Gene Length | 1881 bp |
Protein Length | 626 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639704845 |
Product | thiamine pyrophosphate binding domain-containing protein |
Protein accession | YP_848175 |
Protein GI | 116751488 |
COG category | [C] Energy production and conversion |
COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
TIGRFAM ID | [TIGR03336] indolepyruvate ferredoxin oxidoreductase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0786744 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATGAAC TCCTGATGCC CGGAAGCGAG AAGAAGCATC TCCTTCTGGG CAATGAAGCC ATTGTCCGCG GGGCTCTCGA AGGGAACGTC CGCTTTGTTG CGGCCTATCC CGGGACTCCA TCGTCCGAGA TCATCGACCG TTTCCACCGG ATCGGTTCCG ATGCCGGCGT TTACGTGGAG TACTCGGTCA ATGAAAAGGT TTCGGTGGAA ATGGCGGGGG CGGCGGCCGT TTCAGGGGTC CGCAGCCTGT GCGCCATGAA GCACGTGGGG TTGAACGTGG CTGCGGACGC TTTCATGACC CTGGCCTACG TGGGCGTGAA GGCAGGCATG GTGGTGGTCG TCGCGGACGA TCCTTCCCTG CATTCCAGCC AGAATGAACA GGACAATCGC TATTACGCGA AGCTGGGCAA TGTCCCGATG TTCGAGCCGT CCACGCCCGA GGAGGCGAAG GCGATGACCC TCGAGGCCCT GGCGGTCTCG GAGAAGTATC ACATTCCGGT CATGCTCCGC ACCACCACGA GGGTCAATCA CTGCAGAGGG CCGGTAACCC TGGGAGAGAT CCCTTCGGGA ACGCCGCGCG GCGAATTCAA GAAGGATCCC TTCAACCTGG TGGTCGTCCC GATGGTGGGC CGCAAGCTTC GGCTGGCGCT GCTCGACAAG CTCGCCCTGC TGCAGGAGGA GGCCGAGCGA AGCGCGCTCA ATTTCAGCAC CGGCAAAGGG AAATGGGGGA TCGTCACCAG CGGCGTCTCG TACCTCTACG TGCTGGACGC CGTGCGCGAC CTGGGGCTCC GGGATCGCGT CAAGGTGCTC AAGCTGGGTT TCACGTTCCC GCATCCGAAA GCCCTGATCC GGGACTTCAT GCGTGGACTG GGAAAAGTCC TCGTGGTCGA GGAACTCGAA CCGTTCCTGG AGGAAGCGGT ACGGGTGACC GCGCAGGAGT TCGGTCTGCG CGTCGCTATT GCGGGCAAGG GCGCCGAACT GACGCCGCGC GCCTTCGAGC TGGACGGCGT GAAGGTCAAG CGGGCCATGA GCAGCTTTTT CGGCCTGAAT TACCAACCTC CGCGGGTCTT CACCGCGCCG GCGCTGCCGC AAAGACCTCC CAACCTCTGC CCCGGCTGTC CCCATCGCGC CACCTATGTT TCCGTGCGCA AAGTGTTCGG AGACGATGCC ATCTACCCCA CCGACATCGG CTGCTACACC CTGGGCATTC TGCCGCCTCT GCGCATGGCC GATTTTCTCA TCTGCATGGG CTCCGGGGTG TCCACGGCCG GAGGGTTCAG CAAGGTGCAG GACAAACCGG TGGTGGCTTT CATCGGGGAT TCCACCTTCT TTCATTCCGG GATCACCGGG CTCATCAACG GAGTTTCCCA CGATCACCGG TTTCTCCTGG TCGTGCTCGA CAACGGGACA ACCGCCATGA CCGGGCATCA GCCTCATCCC GGGATCGAAC TGACGCCCGC GGGGAAGATC GAGCCCCGGG TCAGCCTCGA GAATGTCATT CGAGGCTGTG GAGTCAAGCG CCTGGAAGTG GTGAATCCGC TCCGGATGGA AAAGACCCGG GAAGTGCTCG AGGATATGCG CCGGACGCTG AAGGAACCCG GCGTATCGGT GCTGATTTCC AAGAGTCCCT GTCCGCTGTT CGAGAACCGG ATGCTGCGCA AGAGGCAAAA GGTAGTGTTC CAGGTGGATG CGTCCTGCGA TCTGTGCAAG CGGTGTCTCG AGGAGCTGGG ATGCCCCGCT TTCGCATGGG AACCCGGTGC GTCCGGGGAA ATGTGCGTCC GCATCAACGA GGCCCTTTGC AGCGGGTGCA GCGTCTGCTC GCAACTGTGC AAATCCATCA AGCCCAAGCG CATCGAAGAG TCGAGGGGAG GGAGCGAATA A
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Protein sequence | MHELLMPGSE KKHLLLGNEA IVRGALEGNV RFVAAYPGTP SSEIIDRFHR IGSDAGVYVE YSVNEKVSVE MAGAAAVSGV RSLCAMKHVG LNVAADAFMT LAYVGVKAGM VVVVADDPSL HSSQNEQDNR YYAKLGNVPM FEPSTPEEAK AMTLEALAVS EKYHIPVMLR TTTRVNHCRG PVTLGEIPSG TPRGEFKKDP FNLVVVPMVG RKLRLALLDK LALLQEEAER SALNFSTGKG KWGIVTSGVS YLYVLDAVRD LGLRDRVKVL KLGFTFPHPK ALIRDFMRGL GKVLVVEELE PFLEEAVRVT AQEFGLRVAI AGKGAELTPR AFELDGVKVK RAMSSFFGLN YQPPRVFTAP ALPQRPPNLC PGCPHRATYV SVRKVFGDDA IYPTDIGCYT LGILPPLRMA DFLICMGSGV STAGGFSKVQ DKPVVAFIGD STFFHSGITG LINGVSHDHR FLLVVLDNGT TAMTGHQPHP GIELTPAGKI EPRVSLENVI RGCGVKRLEV VNPLRMEKTR EVLEDMRRTL KEPGVSVLIS KSPCPLFENR MLRKRQKVVF QVDASCDLCK RCLEELGCPA FAWEPGASGE MCVRINEALC SGCSVCSQLC KSIKPKRIEE SRGGSE
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