Gene Sfum_4073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_4073 
Symbol 
ID4457562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4953592 
End bp4954323 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content63% 
IMG OID639704843 
ProductABC transporter related 
Protein accessionYP_848173 
Protein GI116751486 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.131918 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCACGA TCAAGAGTCT TCACACGCAC TACGGCAACA TTCGAGCGCT GAAAGGCGTA 
TCGCTTCACG TGCGTTCCGG CGAGATCGTC ACGCTGGTCG GGGCCAACGG GGCCGGCAAG
AGCACCCTCG TGAACACCAT CTGCGGCCTG GTGAAACCCC TGAAAGGGAA GATCGAGTTC
GAAGGCGCTC CCATCGAAGG GATGCCGCCC GAGGACATCG TGCGGCTGGG AATTGCCCTC
GTTCCGGAAG GACGCCAGAT TTTCGCCACC ATGTCCGTTG AGGCGAACCT GGAAATGGGG
GGTTTCGTCC ACCGCCGGAA CGGTCGTCAG GTCCGGGAGG ACATCGGTCG CATGTTCGAG
CGTTTTCCCA TTCTGGGGCA GCGTCGCACA CAGCTTGCGG GGACGCTCAG CGGAGGCGAG
CAGCAGATGC TCGCCATCAG CCGCGCGCTC ATGTCCCGGC CCCGGCTGCT GGTCCTCGAC
GAGCCGTCCA TGGGGCTCGC TCCGCTCATC GTCCGCGAGA TCTTCTCCAT CGTGCGGGAA
CTGAGGCAGG AAGGGCGCAC CATTCTCCTG ATCGAACAGA ATGCCAAGGC CGCTTTGCAG
ATAGCCGACC GAGGGTACGT GCTGGAAACG GGCAAAGTCG TCCTGCAGGG AGAGGGGGCC
GAACTGCTCG AACACCGGGA AGTGCAGAGG GCCTATCTTG GCAAGGGAGC CAGGCAGATT
TGGGATGCGT GA
 
Protein sequence
MLTIKSLHTH YGNIRALKGV SLHVRSGEIV TLVGANGAGK STLVNTICGL VKPLKGKIEF 
EGAPIEGMPP EDIVRLGIAL VPEGRQIFAT MSVEANLEMG GFVHRRNGRQ VREDIGRMFE
RFPILGQRRT QLAGTLSGGE QQMLAISRAL MSRPRLLVLD EPSMGLAPLI VREIFSIVRE
LRQEGRTILL IEQNAKAALQ IADRGYVLET GKVVLQGEGA ELLEHREVQR AYLGKGARQI
WDA