Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_4073 |
Symbol | |
ID | 4457562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 4953592 |
End bp | 4954323 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639704843 |
Product | ABC transporter related |
Protein accession | YP_848173 |
Protein GI | 116751486 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.131918 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCACGA TCAAGAGTCT TCACACGCAC TACGGCAACA TTCGAGCGCT GAAAGGCGTA TCGCTTCACG TGCGTTCCGG CGAGATCGTC ACGCTGGTCG GGGCCAACGG GGCCGGCAAG AGCACCCTCG TGAACACCAT CTGCGGCCTG GTGAAACCCC TGAAAGGGAA GATCGAGTTC GAAGGCGCTC CCATCGAAGG GATGCCGCCC GAGGACATCG TGCGGCTGGG AATTGCCCTC GTTCCGGAAG GACGCCAGAT TTTCGCCACC ATGTCCGTTG AGGCGAACCT GGAAATGGGG GGTTTCGTCC ACCGCCGGAA CGGTCGTCAG GTCCGGGAGG ACATCGGTCG CATGTTCGAG CGTTTTCCCA TTCTGGGGCA GCGTCGCACA CAGCTTGCGG GGACGCTCAG CGGAGGCGAG CAGCAGATGC TCGCCATCAG CCGCGCGCTC ATGTCCCGGC CCCGGCTGCT GGTCCTCGAC GAGCCGTCCA TGGGGCTCGC TCCGCTCATC GTCCGCGAGA TCTTCTCCAT CGTGCGGGAA CTGAGGCAGG AAGGGCGCAC CATTCTCCTG ATCGAACAGA ATGCCAAGGC CGCTTTGCAG ATAGCCGACC GAGGGTACGT GCTGGAAACG GGCAAAGTCG TCCTGCAGGG AGAGGGGGCC GAACTGCTCG AACACCGGGA AGTGCAGAGG GCCTATCTTG GCAAGGGAGC CAGGCAGATT TGGGATGCGT GA
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Protein sequence | MLTIKSLHTH YGNIRALKGV SLHVRSGEIV TLVGANGAGK STLVNTICGL VKPLKGKIEF EGAPIEGMPP EDIVRLGIAL VPEGRQIFAT MSVEANLEMG GFVHRRNGRQ VREDIGRMFE RFPILGQRRT QLAGTLSGGE QQMLAISRAL MSRPRLLVLD EPSMGLAPLI VREIFSIVRE LRQEGRTILL IEQNAKAALQ IADRGYVLET GKVVLQGEGA ELLEHREVQR AYLGKGARQI WDA
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