Gene Sfum_4072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_4072 
Symbol 
ID4457561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4952746 
End bp4953531 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content65% 
IMG OID639704842 
ProductABC transporter related 
Protein accessionYP_848172 
Protein GI116751485 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.134022 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAGG ATTCCAGAGA TTCCCAAGCC GCGCTGCTGG AACTCCACGA GCTGGAGATG 
CGGTTTGGCG GCATCACGGC CCTGCGGGGG TTGACCTACG AGGTCCCGGC AAACATCATC
CAGGCGGTGA TCGGGCCGAA CGGCGCAGGG AAGACGACGC TCTTTCACTG TATCAGCGGC
CTGCTCAGGC CCACCTCGGG GCGCATCGTC TTCGAAGGGC GGGAGATCGA CGGCATGCTT
CCGAACCGGA TCACCCGGCG TGGTATTTCC CGGACGTTCC AGCACGTGGC GCTGTTCCGG
TCCATGACCG TGCTCGAGAA CGTGATGCTC GGCCGCCATC CGAGGACCCA TCGGGGTTTC
CTGTCCACCG GCCTGCGGTT GCCCGGCATG AGGTCCGAGG AACGGCGCAT CAGGAAGGAC
GCCGAGGAGT ATCTCGAGTT CGTCGGACTG AGCGATGCCC GGGGGCTCCC GGCCGGAAGC
CTGCCCCTGG GAAAGCAGAA GATTCTCGAA ATCGCCCGCG CCCTGGCCAC CGAGCCCTCG
CTCGTCTTGC TCGACGAGCC CGCGGGCGGC CTCAACATGA AGGAAACCGA GGAGCTTGGG
GAGCTCATCC GGCGCATTCG CACGCGCGGC GTGACCGTGC TGCTGGTGGA GCACGATATG
AACCTTGTCA TGGAGATTTC CGACCGCATC CTCGTGCTGC ACTACGGGCA GCGATTGGCC
AGCGGGACCC CGGATGAAGT CAAGGATCAC CCCGCGGTCA TCGAGGCCTA TCTCGGAGGG
GAGTAG
 
Protein sequence
MKEDSRDSQA ALLELHELEM RFGGITALRG LTYEVPANII QAVIGPNGAG KTTLFHCISG 
LLRPTSGRIV FEGREIDGML PNRITRRGIS RTFQHVALFR SMTVLENVML GRHPRTHRGF
LSTGLRLPGM RSEERRIRKD AEEYLEFVGL SDARGLPAGS LPLGKQKILE IARALATEPS
LVLLDEPAGG LNMKETEELG ELIRRIRTRG VTVLLVEHDM NLVMEISDRI LVLHYGQRLA
SGTPDEVKDH PAVIEAYLGG E