Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_4072 |
Symbol | |
ID | 4457561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 4952746 |
End bp | 4953531 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639704842 |
Product | ABC transporter related |
Protein accession | YP_848172 |
Protein GI | 116751485 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.134022 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGAGG ATTCCAGAGA TTCCCAAGCC GCGCTGCTGG AACTCCACGA GCTGGAGATG CGGTTTGGCG GCATCACGGC CCTGCGGGGG TTGACCTACG AGGTCCCGGC AAACATCATC CAGGCGGTGA TCGGGCCGAA CGGCGCAGGG AAGACGACGC TCTTTCACTG TATCAGCGGC CTGCTCAGGC CCACCTCGGG GCGCATCGTC TTCGAAGGGC GGGAGATCGA CGGCATGCTT CCGAACCGGA TCACCCGGCG TGGTATTTCC CGGACGTTCC AGCACGTGGC GCTGTTCCGG TCCATGACCG TGCTCGAGAA CGTGATGCTC GGCCGCCATC CGAGGACCCA TCGGGGTTTC CTGTCCACCG GCCTGCGGTT GCCCGGCATG AGGTCCGAGG AACGGCGCAT CAGGAAGGAC GCCGAGGAGT ATCTCGAGTT CGTCGGACTG AGCGATGCCC GGGGGCTCCC GGCCGGAAGC CTGCCCCTGG GAAAGCAGAA GATTCTCGAA ATCGCCCGCG CCCTGGCCAC CGAGCCCTCG CTCGTCTTGC TCGACGAGCC CGCGGGCGGC CTCAACATGA AGGAAACCGA GGAGCTTGGG GAGCTCATCC GGCGCATTCG CACGCGCGGC GTGACCGTGC TGCTGGTGGA GCACGATATG AACCTTGTCA TGGAGATTTC CGACCGCATC CTCGTGCTGC ACTACGGGCA GCGATTGGCC AGCGGGACCC CGGATGAAGT CAAGGATCAC CCCGCGGTCA TCGAGGCCTA TCTCGGAGGG GAGTAG
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Protein sequence | MKEDSRDSQA ALLELHELEM RFGGITALRG LTYEVPANII QAVIGPNGAG KTTLFHCISG LLRPTSGRIV FEGREIDGML PNRITRRGIS RTFQHVALFR SMTVLENVML GRHPRTHRGF LSTGLRLPGM RSEERRIRKD AEEYLEFVGL SDARGLPAGS LPLGKQKILE IARALATEPS LVLLDEPAGG LNMKETEELG ELIRRIRTRG VTVLLVEHDM NLVMEISDRI LVLHYGQRLA SGTPDEVKDH PAVIEAYLGG E
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