Gene Sfum_4071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_4071 
Symbol 
ID4457560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4951766 
End bp4952749 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content62% 
IMG OID639704841 
Productinner-membrane translocator 
Protein accessionYP_848171 
Protein GI116751484 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.23992 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGAA GGGAATGGCT GGGTTTTCTC TGCGCCGCGC TGTTCATCGG GGTTTTCCCC 
TGGGTTGTCG TCCCGTTCAA GGCGGTTTCC CACTATGTGG ACGTGATGGT CTTCGCCGGG
ATTTTCAGCC TGGTGTCGCT CGGTCTGAGC ATGCTCATGG GCTTTGCGGG GCAGATTTCC
ATGGCCCAGG CGGCTTTTTT CGGAATCGGC GCCTACACCT CGGGCATCCT GACGAGCCGC
TTCGGGTGGA ACCCGGTGCC GGCGATGCCG ATCGGCATGC TTGCCTCGGC GGCCGTCGCC
TGGCTGATCG GAATTCCGGC CCTGCGTCTG AAAGGCCATT ACCTTGCCAT GGCGACCCTC
GGGTTCGGAG TCATCGTCCA CATCGTGCTC GGCGAGGAAG TGGCATGGAC CGGCGGACCG
TCGGGCATGT CGGACATTCC GCGCCTGCGC TTCGGCGACG TCAGGATCAC CGGCGAAATC
GCCTGGTACT ATATTGTCTG GGTCACGGTG TTCATCGGAC TGGTCTTTTG CTTCCATATC
CTGCGTTCGA GGGTGGGGCG GGCGCTGCGG GCCATCCATG AAGAGGAGAC GGCGGCGGAA
TCCATGGGAG TTCCCACCGC TCGGTACAAG CTCCAGGTGT TTGTGTTGAG CGCGGTTTTT
GCGGCCCTGG CCGGAAGCTT TTACACCCAT TATGTGACCT GCCTCAATCC CGGCTCGTTC
AACCTGATGT GGTCCATCCG TTTCGTCCTC ATGGTGATGG TGGGCGGCAT GCAGAGCCTT
TGGGGAGCCA TTGTCGGGAC GGTCCTGCTG ACCTTTGTGG GGAATGAATG GCTGCAGGTT
TTTGCCGATT TCGAGATCGT GATCTACGGG GCGATCCTGC TGGTGGTCGC CCTGTTCCTG
CCCGGCGGCC TGATGTCTCT TGCCGGCAGG TGGACGTCGG CGGGGTCTCG GACCGTTGCC
GCGCCGGATG ACGGGGGCTC ATGA
 
Protein sequence
MNRREWLGFL CAALFIGVFP WVVVPFKAVS HYVDVMVFAG IFSLVSLGLS MLMGFAGQIS 
MAQAAFFGIG AYTSGILTSR FGWNPVPAMP IGMLASAAVA WLIGIPALRL KGHYLAMATL
GFGVIVHIVL GEEVAWTGGP SGMSDIPRLR FGDVRITGEI AWYYIVWVTV FIGLVFCFHI
LRSRVGRALR AIHEEETAAE SMGVPTARYK LQVFVLSAVF AALAGSFYTH YVTCLNPGSF
NLMWSIRFVL MVMVGGMQSL WGAIVGTVLL TFVGNEWLQV FADFEIVIYG AILLVVALFL
PGGLMSLAGR WTSAGSRTVA APDDGGS