Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_4070 |
Symbol | |
ID | 4457594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 4950865 |
End bp | 4951752 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639704840 |
Product | inner-membrane translocator |
Protein accession | YP_848170 |
Protein GI | 116751483 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.23867 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAACGG ACATACTCCA GTACACCATC AGCGGTCTTA CCATCGGCGT GATCTACGCC ATGGTGGCGC TTGGCTACAA CATCATTTAC AACGTCACTG AAATCATCAA TTTCGCTCAG GGTGAGTTCG TGATGCTCGG CGGTCTTTTT GCCGCCTTTT TTATTGGCGT CCTCCGGCTT CCTATCGTGG TGGGCTTCTT CGGCGCGGTT CTCGCCACCG GCCTGGTGGG TCTCGTCATG GAGCGGTTCG TGATCCGGCG GGCGAAAAAC GCGAGCGTAC TCTCGCTGAT CATCATCACC ATTGCCCTCT CGATCCTGCT CAAAGGGGGC GCCATGATCT GGTGGGGGAA GGACCCTCAC AGCGTTCCCG CCTTCAGCGC CGGTGGTCCC ATTCTTGTGG CCGGCGCCGC CATCCAGACC CAGGCGTTCT GGGTCGTGGG CGTCAGCGCG CTGATCGTGA TCGGTCTCAC CGTCTTCTTC CACAGGTCCA CCTACGGCAA GGCCATGCTC GCCTGCGCCG ACAATCCCAA CGCGGCGCGC ATGGTGGGAA TCCCGGTCCG TCGGATGGTG CTGCTGTCCT TTGTGCTGAG CGCGGGCATC GGGGCGGCCG CCGGGGTGAT CATTACCCCA ATATCGATGA TGGAATTCGA TCGAGGTGCC CTCCTCGGGC TGAAGGGTTT CGGGGCCGCG GCGCTCGGAG GGCTGGGAAG CTTCTTCGGG GCGCTGGTGG CAGGCGCGAT CCTGGGGCTT GCCGAATCGT TTTGCGCGGG GTACGTGTCT TCGGGGTACA AGGACGCGGT GGCCCTCGTC TTGCTCTTGC TGGCATTGTT CTTCAAACCC GAGGGCCTTT TCGGCAGTGG CGAGGCCGCC AAGCTGAAAA GGTTCTAG
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Protein sequence | MGTDILQYTI SGLTIGVIYA MVALGYNIIY NVTEIINFAQ GEFVMLGGLF AAFFIGVLRL PIVVGFFGAV LATGLVGLVM ERFVIRRAKN ASVLSLIIIT IALSILLKGG AMIWWGKDPH SVPAFSAGGP ILVAGAAIQT QAFWVVGVSA LIVIGLTVFF HRSTYGKAML ACADNPNAAR MVGIPVRRMV LLSFVLSAGI GAAAGVIITP ISMMEFDRGA LLGLKGFGAA ALGGLGSFFG ALVAGAILGL AESFCAGYVS SGYKDAVALV LLLLALFFKP EGLFGSGEAA KLKRF
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