| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_4069 |
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| Symbol | |
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| ID | 4457593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 4949265 |
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| End bp | 4950446 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639704839 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_848169 |
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| Protein GI | 116751482 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.236469 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAC GGAGAAACTG GCTTGCAGCG GCGCTCACCA TCTGCACATT CCTGGGTGCG
CTCTTTGCTC CGATCATCGG TCCGAATGTC CTGGCCGCTC CGGAGCCCTA CAAGATCGGC
GCGGTTTTTT CCATCACGGG GGTCGGTTCG TTCCTGGGCG AGCCGGAGAA GAAAACGGCG
GAAATGATTC GCGACGAGAT CAACAAGCAG GGGGGAATCA ACGGGCATCC GGTCGAGCTG
ATCATCTACG ATGACGAGAG CGACACCACG AAGTGCACGC TCGCGGTGAA AAAGCTGATC
AAGAAGGACG AAGTCCCGGT GATCATCGGT CCCACGCGCA GCGGGGAGAG CATCGCCGTG
GCCACCGTCG CCGAAGAGTC CAAGGTGCCT CTCATCTCGT GCGCGACCAG CTACAAGATC
GTGACCCCCA TCGAGAGCCG CAAATGGGTG TACAAGGTTG CGGGCTCCGA CGCCCACGTG
GTCGGCAAGA TGTACGACTA CATGAAGGGC AAGGGGGTGA AGAAGGTCGC CATCATGACC
GACTCCAGCG GATATGGAGC GAGCGGGCGG GAGGAGCTGC TCCGGCTGGC GCCCGAATAC
GGGTTTACCA TCGTGGCGGA TGAACGGTTC GATCCCAAGG ACACGGACCT CACGGCCCAA
ATGACCAAAA TCCGCGGCAC CCAGCCGCAG GCCGTCGTGA ACTGGTCCAT CGGCCCCACC
CAGATCCTGG CGATCAAGAC GTGGAGAGAC CTCGGGATGG ATGCCATCCC GCTCTTCCAG
AGCCACGGTT TCGGGAGCCT GAAAAATTTG GAACTGGCGG GAAAAGCGGC CGAGGGCGTG
CTGCTGCCCC TGGCTCGTGT GAATGTCGGC TCCCTGCTCC CCGACAGCCA GCCCCAGAAG
AAAATCATCC TTGAATACAC CAGGGCATAC GAGACGCTCT ACAAGGAACC CATCTCATCT
TTCGGCGGTC ACGCCTGGGA TTCGATGCAC CTCGCCATGG CCGCGCTCAA AGCGGTTGGG
CCCGATCCGG CCAAAATCCG CGACCATATC GAACAGACCA AGGGTTTCGT CGGCATGCAC
GGTATTTTCA ATTTCTCCCC GCAGGACCAC TGCGGGTTGA GCAAGGACGA CCTGGAAATG
ATCGTGGTCA AGGATGGGAA GTGGGCGCTG GCCACGCCTT GA
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| Protein sequence | MKKRRNWLAA ALTICTFLGA LFAPIIGPNV LAAPEPYKIG AVFSITGVGS FLGEPEKKTA
EMIRDEINKQ GGINGHPVEL IIYDDESDTT KCTLAVKKLI KKDEVPVIIG PTRSGESIAV
ATVAEESKVP LISCATSYKI VTPIESRKWV YKVAGSDAHV VGKMYDYMKG KGVKKVAIMT
DSSGYGASGR EELLRLAPEY GFTIVADERF DPKDTDLTAQ MTKIRGTQPQ AVVNWSIGPT
QILAIKTWRD LGMDAIPLFQ SHGFGSLKNL ELAGKAAEGV LLPLARVNVG SLLPDSQPQK
KIILEYTRAY ETLYKEPISS FGGHAWDSMH LAMAALKAVG PDPAKIRDHI EQTKGFVGMH
GIFNFSPQDH CGLSKDDLEM IVVKDGKWAL ATP
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