Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_4069 |
Symbol | |
ID | 4457593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 4949265 |
End bp | 4950446 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639704839 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_848169 |
Protein GI | 116751482 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.236469 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAC GGAGAAACTG GCTTGCAGCG GCGCTCACCA TCTGCACATT CCTGGGTGCG CTCTTTGCTC CGATCATCGG TCCGAATGTC CTGGCCGCTC CGGAGCCCTA CAAGATCGGC GCGGTTTTTT CCATCACGGG GGTCGGTTCG TTCCTGGGCG AGCCGGAGAA GAAAACGGCG GAAATGATTC GCGACGAGAT CAACAAGCAG GGGGGAATCA ACGGGCATCC GGTCGAGCTG ATCATCTACG ATGACGAGAG CGACACCACG AAGTGCACGC TCGCGGTGAA AAAGCTGATC AAGAAGGACG AAGTCCCGGT GATCATCGGT CCCACGCGCA GCGGGGAGAG CATCGCCGTG GCCACCGTCG CCGAAGAGTC CAAGGTGCCT CTCATCTCGT GCGCGACCAG CTACAAGATC GTGACCCCCA TCGAGAGCCG CAAATGGGTG TACAAGGTTG CGGGCTCCGA CGCCCACGTG GTCGGCAAGA TGTACGACTA CATGAAGGGC AAGGGGGTGA AGAAGGTCGC CATCATGACC GACTCCAGCG GATATGGAGC GAGCGGGCGG GAGGAGCTGC TCCGGCTGGC GCCCGAATAC GGGTTTACCA TCGTGGCGGA TGAACGGTTC GATCCCAAGG ACACGGACCT CACGGCCCAA ATGACCAAAA TCCGCGGCAC CCAGCCGCAG GCCGTCGTGA ACTGGTCCAT CGGCCCCACC CAGATCCTGG CGATCAAGAC GTGGAGAGAC CTCGGGATGG ATGCCATCCC GCTCTTCCAG AGCCACGGTT TCGGGAGCCT GAAAAATTTG GAACTGGCGG GAAAAGCGGC CGAGGGCGTG CTGCTGCCCC TGGCTCGTGT GAATGTCGGC TCCCTGCTCC CCGACAGCCA GCCCCAGAAG AAAATCATCC TTGAATACAC CAGGGCATAC GAGACGCTCT ACAAGGAACC CATCTCATCT TTCGGCGGTC ACGCCTGGGA TTCGATGCAC CTCGCCATGG CCGCGCTCAA AGCGGTTGGG CCCGATCCGG CCAAAATCCG CGACCATATC GAACAGACCA AGGGTTTCGT CGGCATGCAC GGTATTTTCA ATTTCTCCCC GCAGGACCAC TGCGGGTTGA GCAAGGACGA CCTGGAAATG ATCGTGGTCA AGGATGGGAA GTGGGCGCTG GCCACGCCTT GA
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Protein sequence | MKKRRNWLAA ALTICTFLGA LFAPIIGPNV LAAPEPYKIG AVFSITGVGS FLGEPEKKTA EMIRDEINKQ GGINGHPVEL IIYDDESDTT KCTLAVKKLI KKDEVPVIIG PTRSGESIAV ATVAEESKVP LISCATSYKI VTPIESRKWV YKVAGSDAHV VGKMYDYMKG KGVKKVAIMT DSSGYGASGR EELLRLAPEY GFTIVADERF DPKDTDLTAQ MTKIRGTQPQ AVVNWSIGPT QILAIKTWRD LGMDAIPLFQ SHGFGSLKNL ELAGKAAEGV LLPLARVNVG SLLPDSQPQK KIILEYTRAY ETLYKEPISS FGGHAWDSMH LAMAALKAVG PDPAKIRDHI EQTKGFVGMH GIFNFSPQDH CGLSKDDLEM IVVKDGKWAL ATP
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