Gene Sfum_4067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_4067 
Symbol 
ID4457591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4945714 
End bp4947306 
Gene Length1593 bp 
Protein Length530 aa 
Translation table11 
GC content60% 
IMG OID639704837 
Productferredoxin-dependent glutamate synthase 
Protein accessionYP_848167 
Protein GI116751480 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0069] Glutamate synthase domain 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.256971 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTATT CCACACCAAA TTCCAACGAC GCAACCCTAA CCTTCAACCG CTCGAAAAAC 
GTCGTTCCGA TGAGCGGTCT GTGCAGCCGG TGCATCGACG GATGCCGCGG CAACTGCGAG
GTTTTCCGGG CGACCTTCAG AGGTCGTGAA GTCATTTATC CCGGGCCGTT CGGGCAAATC
ACCGCCGGCG GGGACAAGAC CTTCCCGGTG GACTATTCGC ACCTGAACAT CCAGGGCTAC
GCCATGGGAG CGCACGGTTT GCCGGCGGGA GTCCAAGGGG GTCCCGACAC CGCGATTTTC
CCCATCGTGA GCACGGAAAC GGAATACGGC TGGGACGTCA AGGTGAAGAT GGATATGCCC
GTATTCACCG GCGCCCTCGG TTCCACCGAG ATCGCGCGGG CGAACTGGGA TCATTTTTCC
GTGGGCGCGG CGATCAGCGG GGTGACCCTG GTCTGCGGCG AGAACGTGTG CGGCATCGAT
CCTTACCTGG TGCTCAACGA TGCCAACCGC ATCGTCAAGT CGCCTGAAAT GGACCGCCGC
ATCGAAACCT ACAAGCGCTA CCACAACGGC CGCGGGGAGC TCCTGGTCCA GATGAACGTG
GAAGACACCC GGCTGGGCGT GGCCGAATAC GTCATTGACA AGCACAAGCT GCAGACGATC
GAGCTGAAAT GGGGTCAAGG GGCGAAGTGC ATCGGAGGGG AAATCAAGGT CGACAGCCTG
GAGCGCGCCC TGGAGCTGCA GAGAAGGGGT TACATCGTCA CGCCGGACCC CTCCAGCAAG
ATCATCCAGG CCGCCTACCA CGAAGGCGCG ATCAAGGAAT TCGAGCGCCA CAGCCGTCTT
GGGTTCGTGA GCGAGGACGG TTTCCTCAAG GAGGTCGAGC GGTTGAGAAA ACTCGGCTTC
AAGCGCGTGA CCCTTAAGAC GGGAGCTTAC AGCCTCCGGG AACTGGCCAT GGCGATCAAG
TGGGGCTCCA AGGCCCGGGT CGACCTGCTC ACCATTGACG GCTCCGGGGG AGGCACGGGC
ATGAGCCCCT GGCGGATGAT GGAGGAGTGG GGCATTCCGT CCCTGTACCT GCATTCGGTG
GCCTACGAGT TCTGCGATAA GCTTGCTCAA AAGGGAGAGC GGGTGCCCGA TATCGCCTTT
GCCGGCGGGT TCTCCAGCGA AGACGGCATC TTCAAGGCGC TTGCCCTTGG CGCGCCTTAC
GTGAAGGCGG TCTGCATGGG TCGCGCGTTG ATGATACCCG GAATGGTCGG GAAGAACATC
GCCCAGTGGC TCAAGAAGGA CGATCTGCCC AAGACCGTCA GCCAGTACGG CAAGACCGTC
GAAGAAATTT TCGTGGGCTA TCAGGCCGTC AAGGACATGG TCGGCGAAGA CGAGATCAAA
AAGATACCGC TTGGGGCCAT CGGGTTTTAC AGCTATGCGG ACAAACTGAA AGTGGGTCTG
CAGCAGTTGA TGGCCGGCGC CAGGCGGTTC AAGGTGAGCG CGATCAGCCG CAGAGACTTG
ATGTCGCTCA CCGAGGAATG CTCCAAGGTG ACCAAGATTC CCTACGTGCT GGATGCGTAC
CGGGAGGAGG CGGAAGCCAT CCTGAACGGT TAA
 
Protein sequence
MNYSTPNSND ATLTFNRSKN VVPMSGLCSR CIDGCRGNCE VFRATFRGRE VIYPGPFGQI 
TAGGDKTFPV DYSHLNIQGY AMGAHGLPAG VQGGPDTAIF PIVSTETEYG WDVKVKMDMP
VFTGALGSTE IARANWDHFS VGAAISGVTL VCGENVCGID PYLVLNDANR IVKSPEMDRR
IETYKRYHNG RGELLVQMNV EDTRLGVAEY VIDKHKLQTI ELKWGQGAKC IGGEIKVDSL
ERALELQRRG YIVTPDPSSK IIQAAYHEGA IKEFERHSRL GFVSEDGFLK EVERLRKLGF
KRVTLKTGAY SLRELAMAIK WGSKARVDLL TIDGSGGGTG MSPWRMMEEW GIPSLYLHSV
AYEFCDKLAQ KGERVPDIAF AGGFSSEDGI FKALALGAPY VKAVCMGRAL MIPGMVGKNI
AQWLKKDDLP KTVSQYGKTV EEIFVGYQAV KDMVGEDEIK KIPLGAIGFY SYADKLKVGL
QQLMAGARRF KVSAISRRDL MSLTEECSKV TKIPYVLDAY REEAEAILNG