| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_4064 |
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| Symbol | |
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| ID | 4457588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 4941635 |
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| End bp | 4942240 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639704835 |
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| Product | YD repeat-containing protein |
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| Protein accession | YP_848165 |
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| Protein GI | 116751478 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000373929 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.364165 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGTCCATG GGGCGACCAC TGCGCAGAGC CGGGCGTTCA ACGGCTACGG GGAGCTGGAC
GGGGTGGAGT ACCGGTCGGT GGACAATCCC GTTCATTCCT GGTCGGTTTC CCGGAGCGCG
GCGGGAAGGA TTGCGACCAA AACGGAAACC GTGAACGGTT CAACGGTTGA GTACACTTAC
GATTATGATT CCCTTGGGAG GCTTCTGGCG GTCCGGCTGG ACGGAGTGCC GGCGGAGGAG
TACCGCTACG ACGTCAACGG CAACCGCGTG GAGGAGACCA ACACTCCGCG GGGCATCATC
GGAAGGACTT CGACCTACTC GGAGGAGGAC CACCTGCTGA CTTCGGGCGG GACCGTCTAC
CGCTACGACG CCGACGGGTT TCTCACCACC CGGACGGAAG GCTCGGCGGT GACCCGCTAC
GTGTATTCTT CCCGTGGAGA GCTATTGTCC GTGGCCCTGC CGGACGGGAA ACGGATCGAG
TACGTCAACG ATCCCCTGGG GAGGCGGATC GCCAAGAAAG TGAACGGGAC GACCACGCAA
AAATACCTAT GGCAGGGGCG TACCCGGTTG CTTGCGGTCT TTGACGGAAA CGACGTAGCG
TATTGA
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| Protein sequence | MVHGATTAQS RAFNGYGELD GVEYRSVDNP VHSWSVSRSA AGRIATKTET VNGSTVEYTY
DYDSLGRLLA VRLDGVPAEE YRYDVNGNRV EETNTPRGII GRTSTYSEED HLLTSGGTVY
RYDADGFLTT RTEGSAVTRY VYSSRGELLS VALPDGKRIE YVNDPLGRRI AKKVNGTTTQ
KYLWQGRTRL LAVFDGNDVA Y
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