Gene Sfum_4060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_4060 
Symbol 
ID4457584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4929865 
End bp4930887 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content62% 
IMG OID639704831 
Productrod shape-determining protein MreB 
Protein accessionYP_848161 
Protein GI116751474 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1077] Actin-like ATPase involved in cell morphogenesis 
TIGRFAM ID[TIGR00904] cell shape determining protein, MreB/Mrl family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.203248 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGTC GCATGCTCGA CTTTCTCTCC AAGGACATGG CCATGGATTT GGGTACTGCA 
AACTCGCTCA TTTACGTGAG AGGGAAAGGC GTGGTTCTGG ACGAACCTTC AATGGTCGCC
CTCGACAAGG AAACCAACCA GGTGATTGCC GTGGGCAACG AGGCCAAGAA CCTCGTCGGG
CGGCACGGGA GGAACACGCT GATTTCCCGC CCCATGAAAG ACGGGGTCAT CCATGATTTC
GAGACGGCCA CGTTCATGAT CCGATCGTTT CTGGGGAAGG TGTTCAAGCG GTTGCCCCTT
TCAAAGCCCA AGCTGGTGGT GGCGGTGCCG GCAGGGATCA CTTCGGTGGA GAAGCGGGCG
GTGATCGAGG CCTCGGAGAT GGCGGGAGCG GGTAAAGTCA GCCTGATCGA AGAGCCCATG
GCCGCGGCGA TCGGCACGGG CCTGGCGATC GATCAGCCCG CGGGGCAGAT GGTGGTGGAC
ATCGGCGGCG GGACCACGGA AGTGGCGGTG ATCTCGATGT TTGCGGTCTC CTGCAGCGAG
TCGTTGCGAG TGGCCGGAGA CGAGGCCAAC GAGGCGATCT GCCAGTTCAT GCGGCGCGAG
CACGGGATGA ACATCAGCGA AACCATGGCG GAAGTCATCA AGATCAAGAT CGGCTCGGCC
GTGCCGCTCA AGCGAACCCT GGAGGTCAAG CTTCGAGGCA AGGACCTGGC CACGGGCATG
CCCAAGGTCG TCTCCGTCAC CGACGCGGAC ATCCGCGATG CGATCAAGGA ACCGACCATG
GCCATTGTCG AGGCGGTGCG CAGGGTGCTG GAACGGGTTT CCGCGGATTT GGCTTCGGAC
CTCGCCGAAA ACGGCATCTG GCTGGCGGGG GGCGGGGCTC TGCTCAAGGG CCTGCGCATG
TTGCTCCACC AGGTCACGGG CCTGGAGGTG AAAAAGTCCG AAGACCCTCT GCGCGCGGTC
ATACGGGGCG CGGGGGCCGC CACCGAACAT TACGACTACT ACCGGGACGT CTTCCTGAAC
TGA
 
Protein sequence
MIGRMLDFLS KDMAMDLGTA NSLIYVRGKG VVLDEPSMVA LDKETNQVIA VGNEAKNLVG 
RHGRNTLISR PMKDGVIHDF ETATFMIRSF LGKVFKRLPL SKPKLVVAVP AGITSVEKRA
VIEASEMAGA GKVSLIEEPM AAAIGTGLAI DQPAGQMVVD IGGGTTEVAV ISMFAVSCSE
SLRVAGDEAN EAICQFMRRE HGMNISETMA EVIKIKIGSA VPLKRTLEVK LRGKDLATGM
PKVVSVTDAD IRDAIKEPTM AIVEAVRRVL ERVSADLASD LAENGIWLAG GGALLKGLRM
LLHQVTGLEV KKSEDPLRAV IRGAGAATEH YDYYRDVFLN