| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_4059 |
|---|
| Symbol | |
|---|
| ID | 4457583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 4927458 |
|---|
| End bp | 4929158 |
|---|
| Gene Length | 1701 bp |
|---|
| Protein Length | 566 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639704830 |
|---|
| Product | hydantoinase/oxoprolinase |
|---|
| Protein accession | YP_848160 |
|---|
| Protein GI | 116751473 |
|---|
| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATATTAG GGTTGGATGT GGGTGGCACT CATACCGATG TCGTTCTCAT CGACAAGGAC
GGCATTCATC GCCAAACGAA AGTCCCCACG GACCATGCCG ATTTGCTGGG GTGTGTCCGG
GCGGGCATCG AAGGGGTCAC CGGCGGAATC CCCCCCGACG GCATCAGCCG GGTGGTGCTG
AGCACGACCC TGACGACGAA CGCCATTATC GAAGGCAAGA CGAATGAAAC CGCAGTGATC
GTATCCGCCG GCCCGGGTGT CGACCCCGAA TTCTTTCGGA CCGGCCCTCA TTACTACTGC
GTGGCCGGCT CCATCGACCA CCGCGGCCGT GAAATCCAGT CCGTGAAAAC TTCGGAAATC
CAGGCGATCG CCTCGAAGCT CAAGACCGAC GGGGTCCGGC AGGTGGCGGT GGTGAGTAAG
TTCTCCGTGC GGAATCCGAA GCACGAGACA CAAGTCCGCG ACATCCTTGG AGATTCCTTC
TTCAACGTGG TATTGGGCCA CCGCCTTTCG GGAAACCTGA ATTTTCCGAG GCGTATCGCC
ACCGCGTACC TCAACGCCGC AGTCTGCGAA ACCCATCGCA GGTTTTTCGA TGCGGTCCGG
GAATCGCTTG AAAAGAAGGG ATTGAACGTT CCCATTTACG TGCTCAAGGC CGACGGGGGC
ACCATGAGCC TCGAGGCATC GCTCCAGTGC CCGGGCCAGA CCATTCTATC CGGGCCGGCG
GCGAGTGTCA TGGGTTCCTT GCCGTTCGCC TCGGAGACCG AGGAAACCCT CGTCCTGGAT
ATCGGCGGGA CTTCGACGGA CATGGCGATA TTGATCCGGA AAGTGCCGCT CCTGGACCCG
CTGGGATGCG AGTTGGGCGG GTACAAGACA TTGATCCGCG CGCTCAAGAC GGTCTCCATC
GGCCTCGGCG GGGACAGCGT CGTCCGCCTG GCGGACGGCG GGCTTTCCAT CGGGCCCGAC
CGGAAGGGCC CGGCCATGGC TTATGGAGGG CCTGTGCCCA CCCCCACCGA CGCGCTGTTT
GTGCTGGGCA AGGTGAACGA CGGCGATGCG GGGTCTTCCC GGCGCGGGCT GCAGCCCATT
GCCGACGGCC TGGGGATGTC CCTGGAGGAT ACCGCCAACC GTGTCTTCGA CGAAGCCTGC
CGCAAGATCC TGTCCGCAGC GGGGGAGATG ATTTCGAACA TCAACAGCAA GCCCGTGTAT
ACGGTGCAGG AACTGCTCGG AGGTTACCAG GTGCGGCCCG GCGAAATCCT CGTTCTCGGA
GGGCCGGCGC CGCATTTCGC CCGGCGCCTG GGCGACTTCA CGGATTCACG GGTGCGGGTT
GTCCCCCGTT GGCAGGTGGC CAACGCCCTC GGAGCCGCCC TGGCCAAGAA CACCTCCGAG
GTTACGCTCT TTGCCGATAC CGAGAGAGGT ATTGCGGTGG CACCCGAAGA GGATTTCTAC
AAGACGGTGA AGCGCGACTT CGACCGGGAA TCGGCGGTCC GGTTGGCATT CGATCTGCTC
CGGGACAAGT GTGTCAAGCA GGGGGCGGTA GAATCCGAGC TGGAAATGGA AGTCATCGAA
GACATTCAGT TCAATATGGT CCGGAGCTTT TACACCAGCG GCCGAAACAT ACGCGTGAAA
GTCCAGGTCA AACCCGGCCT GATTCCCGGC TACCGGGAAA TTGCGGACCG GCTGGCCGAA
TCGGTCCCGC CGCAGACATG A
|
|---|
| Protein sequence | MILGLDVGGT HTDVVLIDKD GIHRQTKVPT DHADLLGCVR AGIEGVTGGI PPDGISRVVL
STTLTTNAII EGKTNETAVI VSAGPGVDPE FFRTGPHYYC VAGSIDHRGR EIQSVKTSEI
QAIASKLKTD GVRQVAVVSK FSVRNPKHET QVRDILGDSF FNVVLGHRLS GNLNFPRRIA
TAYLNAAVCE THRRFFDAVR ESLEKKGLNV PIYVLKADGG TMSLEASLQC PGQTILSGPA
ASVMGSLPFA SETEETLVLD IGGTSTDMAI LIRKVPLLDP LGCELGGYKT LIRALKTVSI
GLGGDSVVRL ADGGLSIGPD RKGPAMAYGG PVPTPTDALF VLGKVNDGDA GSSRRGLQPI
ADGLGMSLED TANRVFDEAC RKILSAAGEM ISNINSKPVY TVQELLGGYQ VRPGEILVLG
GPAPHFARRL GDFTDSRVRV VPRWQVANAL GAALAKNTSE VTLFADTERG IAVAPEEDFY
KTVKRDFDRE SAVRLAFDLL RDKCVKQGAV ESELEMEVIE DIQFNMVRSF YTSGRNIRVK
VQVKPGLIPG YREIADRLAE SVPPQT
|
|---|
| |