Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_4054 |
Symbol | |
ID | 4457578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 4922065 |
End bp | 4923681 |
Gene Length | 1617 bp |
Protein Length | 538 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639704825 |
Product | sporulation domain-containing protein |
Protein accession | YP_848155 |
Protein GI | 116751468 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3063] Tfp pilus assembly protein PilF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAAGGA CAAAAAGGTT GCAGCTGTTG TGCGTCGTTG CGGTTCTGCT GTGCGTGGCG TGCGCCACGC CGAGTAGTAA GAGTACGCCG GGACAGTACA GCGCCGAACA ATTGCGGGTA ATGGGAGAGA AGTTCCTGGC GGCCGGCGAT TCGATTCAAG CCGTGAAGTA TCTCACGGCC GCGGAACAGA AGACCCCCAA GGATCCCACT CTTCTCTACT ATATCGGCGT TGCCTACAGC GGTCGGAACA TGCACGCAGA AGCGCTCTCC TACTATCAGA AGGCACTCGC GGAGAAGCCG GACTACCCCG AAGTCTATAA CGCCATGGGG GTGCTCTACG CCGGTCGGGG GCAGTACGAT CAGGCCCAGG CCGCCTTCCA GAAAGTGCTC GCCAGCCCGT TCTACGAGAC GCCGCAGTTT GCCCGGTACA ACCTGGGACT CGTCTACGAA AAGAAAGGGG ACCAGCAAGC CGCTCTCCAG CAGTACCAGG AAGCCGCCCG GCTCCAGCCG ACACATGCCC TGTCCCATCA CCGCACGGCC ATGATCCTTG AAGCGCAGGG TCGTGCCGGT GAAGCGCAGA AAGAGTTCGC GATGGCATTG CAGTACTCGC CCGACCTGGC CGAGGCGCAC ATGCACTACG GCATCCTGTG TTTCGGCACG GGGGATTTCG ACACCGCCGT CCATTCGTTT GCCCGCGTGA TCAGACTCAT GCCCAATACG GTCGAGGCGG ACGAAGCCCG CAAATACCTG GACCGGATCG CCGCGGCCCA GGATGCCGCC TCGCGTTCCA TGCCCTTTCA CCCTCCCGAG AGACGGGTCC GCATGGAAGT GATCCCGCAA CCCGATGAGC GCTACTCGGA ACCGCCTCAG CCCACGTTCC GGACGCTTCC TTCCAAGCCG TCCCCGGAGC CGTCGCGGAT GGAACCTCCC GTACGAGTCG AAACGGCTCC AGGGGTGGAT GCGGCAGTGA GGATGGAACC GCCGGCAAGA CTCGAGCAGC CTGCCGGTCT GGAACCGCCC CCCAGGGTTG AGCCGCCGCC GAGGGTGGAG CCCCCCGCCG ATGCCGGACC GAGCAAATCC GAGTTGAGCG TCGTGCGTGA CGGAAATACG ATCAGAGTGG AACAGATCCC CAAAGCAGGA CTGCCCCTCA AAGCGGAAGA ACCCGCAAGA ATGGAGCCGC CGGGAAGGAT CGACCAGGGC GCCAGGGTTG AACCGCCTGC CATGCCGGAG CCGCCCGCGC GAGTGGAACA GCCCGTCAAG GTGGAAGAAC CGGGCGGCAA GGAAGCGATC GCCGTCACGG ACAAGGCCCC GCCCGCGGGC GCGGCGGACG CGCCTGCGGT CGAACCCGAC CAGGCTCCGC CACCGCCGCC CCAGTTCAAG TTCGTGGTGC AGGTCGGGTC ATTTCCCGAA AAAGCAAATG CCGAGGAAAT GCAGGCCTCA CTGCTCAAGA AGGGCTATGC GACGGTGCTC AGACGGGTCA AGGACCGTAC CCGGGGCATG GTCTACGTGC TGCAGCTCAA ACCCGTCGAG TCCCTCTCCA AGGCCAGCAC GCTGGCGACC CAACTGGAAA CCGAAGTCCA GGGCACACCG ACGGTTCTGA GGGTGCGGGC CGACTGA
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Protein sequence | MLRTKRLQLL CVVAVLLCVA CATPSSKSTP GQYSAEQLRV MGEKFLAAGD SIQAVKYLTA AEQKTPKDPT LLYYIGVAYS GRNMHAEALS YYQKALAEKP DYPEVYNAMG VLYAGRGQYD QAQAAFQKVL ASPFYETPQF ARYNLGLVYE KKGDQQAALQ QYQEAARLQP THALSHHRTA MILEAQGRAG EAQKEFAMAL QYSPDLAEAH MHYGILCFGT GDFDTAVHSF ARVIRLMPNT VEADEARKYL DRIAAAQDAA SRSMPFHPPE RRVRMEVIPQ PDERYSEPPQ PTFRTLPSKP SPEPSRMEPP VRVETAPGVD AAVRMEPPAR LEQPAGLEPP PRVEPPPRVE PPADAGPSKS ELSVVRDGNT IRVEQIPKAG LPLKAEEPAR MEPPGRIDQG ARVEPPAMPE PPARVEQPVK VEEPGGKEAI AVTDKAPPAG AADAPAVEPD QAPPPPPQFK FVVQVGSFPE KANAEEMQAS LLKKGYATVL RRVKDRTRGM VYVLQLKPVE SLSKASTLAT QLETEVQGTP TVLRVRAD
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