Gene Sfum_4052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_4052 
Symbol 
ID4457611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4920114 
End bp4920710 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content62% 
IMG OID639704823 
ProductGTP-binding protein, HSR1-related 
Protein accessionYP_848153 
Protein GI116751466 
COG category[R] General function prediction only 
COG ID[COG0218] Predicted GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATCCG CCATGGTGAT CAAATCCGCC GAATTCAAGA CCGCGGCCGT GCGCTCAGGC 
CAGTATCCGG ACGATCATCT TCCGGAAGTG GCCTTTGCCG GGCGTTCCAA CGTCGGGAAG
TCCTCCCTCA TCAACTGCCT GTTGCAGCGC CGGAAACTGG TACGCACGAG CCGCACCCCG
GGGCAGACGC AGACCATCAA TTTTTTCCTG ATCAACGGGC TTTTCTACTG CGTGGATCTC
CCGGGATACG GTTTTGCCCG GGTTCCGATG GCGGTGCGGG CCCAATGGGG TCCCATGGTG
GAATCATACC TGGGGGGCCG GCCGAACCTG CGCGGCGTGG TCCAAATCCT GGATGCACGG
CACCCGCCCA GCCCGGATGA CCTGAAGCTC TGGAACTGGC TCATCGATCG CAAAATCCCG
GCCGTTCCGG TTTTGACCAA AGCGGACAAG GTTCCCCGTA CGAAATGGGA TGCAGCCGCA
TCCCGGGCAT CTCTGAGCCT CGGAATCCCT CGCGACAGGC TCCTCCTCTT CTCCTCCGAA
ACCCGGCATG GGCGCGATGC GCTGCTGCTC CAGGTCGCCG CCTGGATCGA TCCTTGA
 
Protein sequence
MPSAMVIKSA EFKTAAVRSG QYPDDHLPEV AFAGRSNVGK SSLINCLLQR RKLVRTSRTP 
GQTQTINFFL INGLFYCVDL PGYGFARVPM AVRAQWGPMV ESYLGGRPNL RGVVQILDAR
HPPSPDDLKL WNWLIDRKIP AVPVLTKADK VPRTKWDAAA SRASLSLGIP RDRLLLFSSE
TRHGRDALLL QVAAWIDP