Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_4052 |
Symbol | |
ID | 4457611 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 4920114 |
End bp | 4920710 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639704823 |
Product | GTP-binding protein, HSR1-related |
Protein accession | YP_848153 |
Protein GI | 116751466 |
COG category | [R] General function prediction only |
COG ID | [COG0218] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATCCG CCATGGTGAT CAAATCCGCC GAATTCAAGA CCGCGGCCGT GCGCTCAGGC CAGTATCCGG ACGATCATCT TCCGGAAGTG GCCTTTGCCG GGCGTTCCAA CGTCGGGAAG TCCTCCCTCA TCAACTGCCT GTTGCAGCGC CGGAAACTGG TACGCACGAG CCGCACCCCG GGGCAGACGC AGACCATCAA TTTTTTCCTG ATCAACGGGC TTTTCTACTG CGTGGATCTC CCGGGATACG GTTTTGCCCG GGTTCCGATG GCGGTGCGGG CCCAATGGGG TCCCATGGTG GAATCATACC TGGGGGGCCG GCCGAACCTG CGCGGCGTGG TCCAAATCCT GGATGCACGG CACCCGCCCA GCCCGGATGA CCTGAAGCTC TGGAACTGGC TCATCGATCG CAAAATCCCG GCCGTTCCGG TTTTGACCAA AGCGGACAAG GTTCCCCGTA CGAAATGGGA TGCAGCCGCA TCCCGGGCAT CTCTGAGCCT CGGAATCCCT CGCGACAGGC TCCTCCTCTT CTCCTCCGAA ACCCGGCATG GGCGCGATGC GCTGCTGCTC CAGGTCGCCG CCTGGATCGA TCCTTGA
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Protein sequence | MPSAMVIKSA EFKTAAVRSG QYPDDHLPEV AFAGRSNVGK SSLINCLLQR RKLVRTSRTP GQTQTINFFL INGLFYCVDL PGYGFARVPM AVRAQWGPMV ESYLGGRPNL RGVVQILDAR HPPSPDDLKL WNWLIDRKIP AVPVLTKADK VPRTKWDAAA SRASLSLGIP RDRLLLFSSE TRHGRDALLL QVAAWIDP
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