| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_4040 |
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| Symbol | |
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| ID | 4457599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 4907073 |
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| End bp | 4907753 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639704811 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_848141 |
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| Protein GI | 116751454 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAATCA CCCATGCATT GAAGGGGCGC ACATCCACCA TGACACATCC GGACCAAGCC
GAAGCAAAGT TGAATCTCTA CATCAAGTTC TTGAAGGAAA GGCTTTTTTT CGAGCCGCAA
TCCGCCACGC TCCACTATAA CCTCGGCCTC GCCTACTCTC AAAAGCAGCT TGAGGACGAG
GCCATTTCCG AATTCAAGCA GGCCCTCGAA TGCGACCCCG GACTTGCCCA GGCTCACGTG
AACCTCGGAG GGCTCTATCT TCGCAAGGGC GACCATGCGC AGGCGCTGGC GGAGAATCTC
AAGGCGGTCG AGCTCGACCC GAACCTGCCC ATGGCCCACA ACAATGTGGC CTTCGCGCGC
CTGCAGGAGG GCGACTACGA ACGGGCCATC GAGTCCAGCC GGAGGGCCGT CGAACTGATG
CCCGGACTGA TCCAGGCGCA CAACACCCTC GCCGTGGCGC TCATTCAGGC CGGCGATCTC
GACTCCAGCA TCGCCGTCTC CCTGGACATG CTGAAAATGA ACGAACGGTT CGGACCGGCC
CACTACAACC TGGCTGTCGC CTATAAAGTG AAAGGGGATC TGGAGCGCGC TCGAGTTCAC
TACGCTCAGG CACTTTCCCT GGGAGGGCCC GTGGATCCCC TGCTGGAAGC CGAGCTGAGT
CTCGAAGACC GCCGATCCTG A
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| Protein sequence | MKITHALKGR TSTMTHPDQA EAKLNLYIKF LKERLFFEPQ SATLHYNLGL AYSQKQLEDE
AISEFKQALE CDPGLAQAHV NLGGLYLRKG DHAQALAENL KAVELDPNLP MAHNNVAFAR
LQEGDYERAI ESSRRAVELM PGLIQAHNTL AVALIQAGDL DSSIAVSLDM LKMNERFGPA
HYNLAVAYKV KGDLERARVH YAQALSLGGP VDPLLEAELS LEDRRS
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