Gene Sfum_4039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_4039 
Symbol 
ID4457598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4906417 
End bp4906935 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content60% 
IMG OID639704810 
Productpeptidylprolyl isomerase, FKBP-type 
Protein accessionYP_848140 
Protein GI116751453 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCAGG ATCGATCGGG CATGGAAATA GGGCAGGATA TGTTCGCCGT CATCGAATAC 
ACCGTGCAAC TGGACGACGG TTCCTTCGTG AAAGGGGAAG ACGGGCCGGT ATCCATGAAC
TTCGTGGTGG GCTACAACCA GATCATGCCC TCCCTGGAAC TAAAGCTCAT CGGACTGCGC
GAAGGCATGG AAAAGGAGTT CGTCATCCCG GCCTGCGACG CCTTTGGAGA GTACGACCCG
CACCAGGTCC GCATCAGACC CCTGGAAGAG TTTCCCGAAG GCCGGAACCT GGAGGCAGGT
AAATGGGCCA TCGCGACCAA TCCCGAAACG GAGGCCCAAT TCAGCTATTT CGTCAGGGAA
AAGACCTCGG AAACGGTCAC GCTCGATTTC AACCACCCAC TGGCGGGGCG GGCTCTGCAT
TACCGAGTGC GCGTCATGCG CGTCAGGCCG GCCGACGAGG AAGAACTGCT GTACCTGCGG
CCCTGCGGAC AGGAAGGAGA GCCGGCCCCG GGGGAATGA
 
Protein sequence
MEQDRSGMEI GQDMFAVIEY TVQLDDGSFV KGEDGPVSMN FVVGYNQIMP SLELKLIGLR 
EGMEKEFVIP ACDAFGEYDP HQVRIRPLEE FPEGRNLEAG KWAIATNPET EAQFSYFVRE
KTSETVTLDF NHPLAGRALH YRVRVMRVRP ADEEELLYLR PCGQEGEPAP GE