Gene Sfum_4037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_4037 
Symbol 
ID4457596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4904964 
End bp4905950 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content58% 
IMG OID639704808 
ProductAsnC family transcriptional regulator 
Protein accessionYP_848138 
Protein GI116751451 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGATTCAA TGAGCCGAAT ATTGCTCGAT CGGGTGCAAC GCTCTTTTCC ACTGGTGCCG 
GAACCTTACC ACGCGCTTTC GGAAGGTCTT GGAATAAGTG GCGGAAGGGT GTGCGAACTC
ATCGGAACAC TCAAGGAACG CAAGCTTATC AGGCAGATCA GCGCGATCTT CAACACGGGG
GCGCTGGGGT ACCGGAGCAG CCTCGTGGCG ATGGCCGTGC CGGAAAAAGA CCTGGAGCAC
GCGGCTTCGG CGATCAATCG GTATCCGGGG GTGAGTCACA ACTATCTTCG ACCGGGCAAC
TACAACATGT GGTTCACGGT TGCCGTGCCG CCGGGAAAGG CGCTCGAAAG AACCGTAGGG
GAACTCGCGC AATCCGCCGG CGGCTGGCCG GCCCTGATCC TTCCCGCCAT CCGCAAGTAC
AAGCTGGCGG TCGTGCTCGA TGTCCTGGAG GAGGGGGAAG GGGAACTGAG TGAGGAGCGC
GGCGATTTGC CCCCGATTGA GTCCACCGTC GCCTTTGAAG CGACGGATGA AAACATCCGG
ATCGTGCGCT GCATTCAGGA GGACCTGCCT CTGGTTGAGG CCCCCTTCCG GGCCTGGGCC
GAAAGCCTGG ACATGGGGGA GACGAAGCTC ATCGAGACAA TGAACCGGTG GCTTCAACAG
GGGTTCATCC GGCGTTTTGC GGCGGTATTG AATCACCGCC AGGTCGGGTT CAACTCCAAC
GGCATGGTGG TATGGAACTG TCCCCGGGAC CGGATCGACG AATACGGGCG AATCCTGTCC
TCATATCCTG AGGTGAGCCA CTGCTATCAA AGACCCTCGT ATTCCGAATG GCCGTTCAAC
CTCTACGCGA TGATTCACGG CCGCAGTGCG GATGATTGCC GAAAGGTGGC GGAGCGGTTG
GGGGAAGCGA TCGGCATGAA AGAATACGAG ATTTTGTTCA GTACGAAAGA GTTCAAGAAA
ATCAGGCTAA AACTCTTCTG GAGCTGA
 
Protein sequence
MDSMSRILLD RVQRSFPLVP EPYHALSEGL GISGGRVCEL IGTLKERKLI RQISAIFNTG 
ALGYRSSLVA MAVPEKDLEH AASAINRYPG VSHNYLRPGN YNMWFTVAVP PGKALERTVG
ELAQSAGGWP ALILPAIRKY KLAVVLDVLE EGEGELSEER GDLPPIESTV AFEATDENIR
IVRCIQEDLP LVEAPFRAWA ESLDMGETKL IETMNRWLQQ GFIRRFAAVL NHRQVGFNSN
GMVVWNCPRD RIDEYGRILS SYPEVSHCYQ RPSYSEWPFN LYAMIHGRSA DDCRKVAERL
GEAIGMKEYE ILFSTKEFKK IRLKLFWS