| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_4012 |
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| Symbol | |
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| ID | 4457658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 4872697 |
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| End bp | 4873374 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639704783 |
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| Product | hydrogenase accessory protein HypB |
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| Protein accession | YP_848113 |
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| Protein GI | 116751426 |
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| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
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| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.411512 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTCAGA TTAACGTTCC CGTGGTTCGC AATATCCTTC AGGCCAACGA ACGGCTGGCG
GCGGAAAATC GGAGACGGTT CGACGAGGCG GGCATATATG TGATCAACCT CATGAGCTCA
CCCGGTGCCG GCAAGACGTC CCTCCTGGAG CGGACCATCG AAGGGCTCGC CGGCCGGGTG
AAAATGGCCG TGATCGAAGG TGACGTGCAG TCCTCGTTCG ATGCCGAGCG GATTCAGCGC
AAGGGAGTGC AGGCCGTGCA GATCAACACC GACGGCGGGT GCCACCTGGA CGGCAACATG
ATCCAGATTG CGCTGGAAGC CATCGATCTG AAGGGTCTCG ACCTGCTCAT CATCGAAAAC
GTCGGGAACC TGGTCTGCCC CGCTGAATTC AATCTCGGAG AACACGACAA GGTCATGATC
CTGAGCGTTG CCGAAGGGGA CGACAAGCCC TTGAAATACC CGCTCATGTT TCAGCTTTCC
TCGGTGCTCC TGGTCAACAA GATCGATCTT CTCCCGTACA TCGACTGCGA TCCCGCCAAG
ATTCGGGAAC AGGCCCTCCA GTTGAACGGC GCTCAGCGGA TTTTCGAAGT TTCGTGCCGC
ACGGGCGAAG GCTTGCAGCC GTGGTTCGCA TGGCTTCAGG ACAAGATCCG CGAACGCAAA
GCCCGGCGTT CGGGCTGA
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| Protein sequence | MAQINVPVVR NILQANERLA AENRRRFDEA GIYVINLMSS PGAGKTSLLE RTIEGLAGRV
KMAVIEGDVQ SSFDAERIQR KGVQAVQINT DGGCHLDGNM IQIALEAIDL KGLDLLIIEN
VGNLVCPAEF NLGEHDKVMI LSVAEGDDKP LKYPLMFQLS SVLLVNKIDL LPYIDCDPAK
IREQALQLNG AQRIFEVSCR TGEGLQPWFA WLQDKIRERK ARRSG
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