Gene Sfum_4002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_4002 
Symbol 
ID4457681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4857209 
End bp4857625 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content59% 
IMG OID639704772 
Producthypothetical protein 
Protein accessionYP_848103 
Protein GI116751416 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000224316 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.661672 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCGCTTG TCGCCGTGCG GGTTCGAGCC CCGCCCCGGG CACCAGTTTA CAGGGATCTC 
GACTTTTTGA TAGTCCGGGA AGGTCCGTTT TATCCCGCTA TTATCCCGCT TTTTGAAATG
ACGGGCTCCA TTCACAGGGG CATGATCGAA CTTCGGGGGA TGGCCCAGCG TGCCGGGTTC
ACTCCAAGCG AACGAGTCGC AATCAAGAAA GCGATTGTTG ACGCTGTGGA AGAACGACGC
GGGAATCCAA ACCTAAAATC AAATCCGGTC AAATGCCCGG AATTGGAAAA GGGCGAAGAG
ACCCGCTCCA TCGCCGCCAA GCGTGCCGGG TTCACGAGTG AGATGACGAG CCGCCGGGCG
GAGCGCGTGG TCAATCGCGG CATCCCGGAG CTTGTCGGCT TGCGAGGATA CCCCTAG
 
Protein sequence
MALVAVRVRA PPRAPVYRDL DFLIVREGPF YPAIIPLFEM TGSIHRGMIE LRGMAQRAGF 
TPSERVAIKK AIVDAVEERR GNPNLKSNPV KCPELEKGEE TRSIAAKRAG FTSEMTSRRA
ERVVNRGIPE LVGLRGYP