| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3961 |
|---|
| Symbol | |
|---|
| ID | 4457710 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 4815950 |
|---|
| End bp | 4816894 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639704732 |
|---|
| Product | DNA binding domain-containing protein |
|---|
| Protein accession | YP_848063 |
|---|
| Protein GI | 116751376 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1150] Heterodisulfide reductase, subunit C |
|---|
| TIGRFAM ID | [TIGR01764] DNA binding domain, excisionase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGAGA TTCGTGTGGG AGAATTTGCC GAAAAGCTCG GCGTGCATCG CAACACGGTG
CGCAATTGGA TCAAGAACGG CACCTTGCGC GCCACGAGCA CGGTTGCCAA GAAGTATTTC
ATCCAGCTTG AAGACCTGCG CCGCTTCTGC CGCTTTCAGT CCATACCGGA AAGCGTTTTC
ACCCAGTTGG CACAATGGGA TGTCGAGTCT TTACCAGTCA AGGAGGAAAC CATGAATATA
AACACAACGA GTGCCCCCGA ATTGAGAACG ATCGGGATAC GCGACAATCT TCTACGGGCC
GATCCCCAAT GGGCCGACGT GTGCCTGACC TGCGGCAGCT GCGCCAGTGC CTGTCCCATC
TCCGGCGTGG ACGGTCTTGA CCCGCGCAAA ATCGTCCGCA TGGTGGTGCT GGGACGCACC
AAGGAAGTGG TTGATTCCAA CTGGACCTGG AAGTGCACCT TGTGCGGCAA GTGCGAAGAA
GCCTGTCCCA TGAATGTGGA ACTGGTCAAA CTCTTTCGCC GGATCCGCGG ACTGCGGGAA
CGCGAGAAGG TACCCGGCCC TCTGCACAAG GGGGTGCTGA TGGCGCTGCG CCGCGGCAAC
AACCTGGGCA TACCCAAATC CGAATTCGTC GACCTGCTCG TGGAAGTCGG TGAAGAGCTG
GCTGAAGAAT GCTGCCCCGG TTTCGCCACT CCCGTCGACG TGCAGGGCGC CAACCTTCTG
GTCACCGTCA ACTCCAAGGA ACCTTTCGGT GAACCGGACG ACATGAAGTT CTGGTGGAAG
ATTTTCCATG CCGCCGGGGA ATCCTGGACC ATTCCTTCGG AGAATTGGGA AGGGGTCAAC
TGGGGACTGT TCACCGGTGA CGACGAGGCC ATGCGGATCA TGGTCGGCCG CCTGGTGGAC
AACATGTACC GTCTGGAGGC GAAAAAACTT GTCCTGCCCG AATGA
|
|---|
| Protein sequence | MIEIRVGEFA EKLGVHRNTV RNWIKNGTLR ATSTVAKKYF IQLEDLRRFC RFQSIPESVF
TQLAQWDVES LPVKEETMNI NTTSAPELRT IGIRDNLLRA DPQWADVCLT CGSCASACPI
SGVDGLDPRK IVRMVVLGRT KEVVDSNWTW KCTLCGKCEE ACPMNVELVK LFRRIRGLRE
REKVPGPLHK GVLMALRRGN NLGIPKSEFV DLLVEVGEEL AEECCPGFAT PVDVQGANLL
VTVNSKEPFG EPDDMKFWWK IFHAAGESWT IPSENWEGVN WGLFTGDDEA MRIMVGRLVD
NMYRLEAKKL VLPE
|
|---|
| |