| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3951 |
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| Symbol | |
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| ID | 4457701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 4807195 |
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| End bp | 4807860 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639704724 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_848055 |
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| Protein GI | 116751368 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.365778 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAGAAT TCCGATTCGG CATTTTGCAC GATGCCGCGC CCTTGATACT GGAAGGGCTC
CGGGTGACCG TATACGTCTC GCTGCTTTCG TTTGCGCTTG CGCTGGTCAT AGGGGTCGCG
GTCGGAATCT TGAGGTCGAA ATCGCCCCGG ATGAGGGCGG TTTTTTCACC TTATGTCGAG
CTGTTCAGGG GAACGCCGCT CCTGATACAG CTCTTTTTTA TTTATTACGG TCTGCCCACC
ATGGGCCTCA CCCTGGACAG TTTCAGCGCG GGCGTTCTGG GGCTTGGACT GAACGGAGGC
GCGTATATCT CGGAAATCAT CAGAGGGGCT TTGCTTTCCG TGGACAAAGG CCAGCAGGAT
GCGGCGTTCT CTTTCGGATT CTCGTGGCTT CAGAGCATGA CCTACGTGAT TCTGCCCCAG
GCCGTCTCGG TGGCCCTGCC TCCCCTCGTG AGCTCCTTTT CGGCGCTGCT GAAGGAGTCG
TCGCTGGTTT CCGTTCTTGC CATAACGGAA TTGACCCGGG TCAGCCAGCT CATCTATACG
CGCACTTTTC GCGCTCTCGA AGTCTACCTG GCCATTGGGG TCCTGTATTT CCTGATGACT
TGGTTTGTTG CCCGGCTCTC AAAACGATTG GAGCGGAAAT ACAGGGTGAG CGGGCGAATT
CCGTGA
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| Protein sequence | MEEFRFGILH DAAPLILEGL RVTVYVSLLS FALALVIGVA VGILRSKSPR MRAVFSPYVE
LFRGTPLLIQ LFFIYYGLPT MGLTLDSFSA GVLGLGLNGG AYISEIIRGA LLSVDKGQQD
AAFSFGFSWL QSMTYVILPQ AVSVALPPLV SSFSALLKES SLVSVLAITE LTRVSQLIYT
RTFRALEVYL AIGVLYFLMT WFVARLSKRL ERKYRVSGRI P
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