Gene Sfum_3948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3948 
Symbol 
ID4457733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4804913 
End bp4805494 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content60% 
IMG OID639704721 
Producthypothetical protein 
Protein accessionYP_848052 
Protein GI116751365 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.187867 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTCG GAAGGCCCGG GAGCCGCCTC AAGACTGACG TCGATGCGGC CGGAGGAGGG 
GATGGCATGA AGGGAGTCGA GACCATGCGG TTCAAGCACT ACCCGCCCGA GCGGTTGATG
ATCGAGAGCA TTGCATCGAG ACTCACGCCC GATGAGAACG CCTGCCGGTT GTGGTTGATG
GAATATACCA TCGACCGGGG AATTCCCTAC AACATCGACA ACGGCGCGGG CGCGGAGCCC
CCCGGTTCGA GATCGTCGGT TCGAAGCCTC GCGGAGAAGC GGGCAATCGT CGTGGGTCCC
GATGGAAACG TCAATTTCAT TTACCCGGTT TCCGCCCTGC CCACGCAGCA CAGGGTCCGC
TTGAGCGACG GTCGGTCATT TTGCGCCATG TGTGCCGTCG ATGCCCTCGG AGCCGCCTTC
ACTTTCAAGC AGGATATCCG GGTTGAATCG AGCTGTATCG AGTGCGGTGA GACGATTCAC
GTCGATATCG AGACGCGGCG GATCGCAAGG CTCTGTCCCG AGTCGGCGCA TGTTCTCCAC
GTCGATCTCA ACAAGGTCGC GAACTGGGCG GCAAGTTGCT GA
 
Protein sequence
MNVGRPGSRL KTDVDAAGGG DGMKGVETMR FKHYPPERLM IESIASRLTP DENACRLWLM 
EYTIDRGIPY NIDNGAGAEP PGSRSSVRSL AEKRAIVVGP DGNVNFIYPV SALPTQHRVR
LSDGRSFCAM CAVDALGAAF TFKQDIRVES SCIECGETIH VDIETRRIAR LCPESAHVLH
VDLNKVANWA ASC