| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3941 |
|---|
| Symbol | |
|---|
| ID | 4457726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 4799624 |
|---|
| End bp | 4800715 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639704714 |
|---|
| Product | permease |
|---|
| Protein accession | YP_848045 |
|---|
| Protein GI | 116751358 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0701] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.371691 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGATCGCCG GGCTCCTCAA CAGGGTCTTC ACGGCGTTTT TCGATATCCT CAACGGCGCA
TCGGTCTGGC TGGTGTTGAG TTTTGCCCTT GCGGGCACTC TGCACAGTTT TCTGCGACCG
GAGAAGCTCC AGAGAATGCT GGGAAACGGG AGGCTTTCCT CCATCATGCG GGGTACGGTT
TCAGGAATGT TGCTCCCCAT TTGCAGTTGC GGGGTCATTC CGCTGGGACT CGGCCTCTAC
TATTCCGGCG CGTGGCTCGG CCCCACGCTG GCTTTCATGA CGGCCACCCC CATCATCAAT
CCTGCGGCGG TACTCCTGGC CTACGGACTT TTGGGGCCTC AGATCGCCAC GATCTATCTC
GTAAGCGGCT TTGTCGTCCC GATGATCGTG GGCATGGCGG GGAACCGTTT TGCCGGCCCC
GAACTGCGGG CGCCCGGTAT CGAGGAGTTC GTAAACGTGC CGGCGATGGA GCACGGCGAC
GGCATTGGGG TGGGCCGCAA ATTCATTTCC GGCCTTCATT GGGGTTTCAT GGAACTTGGG
GTCATGGTGA GCAGGTACAT TGTAATGGGA GTCTTCCTGG CGGGCGTGAT CATCGCCGTC
ATTCCCAGAA CCACGATCCA GGAATACCTC GGAAACCCCG GCATGATCTC CCTTCTCGGT
ATCGCGGTCC TGGGGGCCGT CATGTACGTG TGCGCCGTCG GGCACATCCC TTTTGTGGCC
GCATTGGTGG CGAGCGGCGC CGCGCCGGGG ATTGCCGTCA CTTTCCTCAT GACGGGCGCA
GCGACCAATC TTCCCGAGCT CATCAGCATT TACAGGACGA TCGGCAAACG CGCGGTGGCC
ATCTACACCC TGACAATGGT CGCCGCTTCC ATGCTGATCG GCTACCTGAC CAACGTGCTG
CTGTTGAGGG ACTTTGTGCC CTTTTTCGGG AGCGATCACG CCACGGGAAC GGTCGGCATG
GCGAAGAGGC TCATCGTGGC CGCTCCAAAA CCGCTGGAAT ACCTCTGTTC GGGGATCATT
CTGGCTCTTG CTGTCCATGC GTGTCTGCCT CGAATCCGGC AACTCCTCAC CGGCGCGGAA
TGCTCCCGAT GA
|
|---|
| Protein sequence | MIAGLLNRVF TAFFDILNGA SVWLVLSFAL AGTLHSFLRP EKLQRMLGNG RLSSIMRGTV
SGMLLPICSC GVIPLGLGLY YSGAWLGPTL AFMTATPIIN PAAVLLAYGL LGPQIATIYL
VSGFVVPMIV GMAGNRFAGP ELRAPGIEEF VNVPAMEHGD GIGVGRKFIS GLHWGFMELG
VMVSRYIVMG VFLAGVIIAV IPRTTIQEYL GNPGMISLLG IAVLGAVMYV CAVGHIPFVA
ALVASGAAPG IAVTFLMTGA ATNLPELISI YRTIGKRAVA IYTLTMVAAS MLIGYLTNVL
LLRDFVPFFG SDHATGTVGM AKRLIVAAPK PLEYLCSGII LALAVHACLP RIRQLLTGAE
CSR
|
|---|
| |