Gene Sfum_3927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3927 
Symbol 
ID4457747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4784470 
End bp4785765 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content64% 
IMG OID639704700 
ProductFAD dependent oxidoreductase 
Protein accessionYP_848031 
Protein GI116751344 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.610841 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAG ACAAAACCAC CGCAATAGTG GTCGGGGCCG GTCCCGCCGG CAGTACGGCC 
GCATACCTTT TGGCCCGTGA GGGGCACGAG GTGATCCTGG TGGAGCGGGG AACCGCTCCG
GGCTGCAAGA ACATGTACGG CGGGCGCATG TACAGTCACG CGTTGAACCG GATCATTCCG
GAATTCTGGA CAGAGGCTCC GGTGGAGCGC TGCGTTGAGC GCGAGCTCAT CACGTTCCTC
GACGGCGAGC GTTCGGTATC GGTCGCCTGT CGGGATTCGG AGTGGGCCGG TCCCGGCTGT
CATTCCTTCA CGCTGCTGCG GGCCGAATTC GACGCATGGC TCGCCGCGAA GGCGGAGGAG
GCGGGAGCGC TTCTGGCGTG CGGAATCCGG GTCGACGACC TGGTGTTTGA AAACGGCCGG
GTCGTGGGCA TCCGGGCCGG GGAAGATGAA ATGATGGCCG ACGTGGTGAT CGCGGCAGAC
GGGGTCAATT CGGTCCTGGC CCGGAAGGCG GGCCTTGCCG GGCCTTTTTC GGCGCGCCAG
GTGGCCACGG GGGTCAAGCA GATCATCGAG CTGCCCGCGC AGACCATCAA CGAGCGCTTC
CAGGTCGACG ACTTCCACGG CGCGGCGCAA CTGTTCGTGG GGGACTGTTC CGGGGGAGTC
CAGGGAGGCG GTTTTCTCTA CACCAACAAG AACAGCATTT CCCTGGGGCT GGTCTTCAAC
GTCGCGGAGC TTAGTCGCTG CCGGATGAAG CCGGCGGAGG CCCTCGAGGA CTTCAAGAGC
AGCCCGCACA TCGCCCCTTT GATCGAAGGG GGGCGGGAAG CCGAGTATTC GGCGCACCTG
GTGCCCGAGG CGGGGCTGGG GATGATGCCC GAGTTGTTCG GCGACGGGAT ATTGGTTGCC
GGGGATGCCG CGGGCTTCGT GCTCAACCTT GGTTATACAG TGCGGGGCAT GGACTTTGCC
GTCGCCTCGG GGGAGGCGGC CGCGCGGGCG GTGATGGAGG CGAAGGCGCA TAACGATTTT
TCCCGCAACG GTCTTTGCCG CTACCGGGAG TTGCTGCGGG AAAGCTTCGT CCTCAGGGAC
CTGGAAGCCT ACCGGAGTGC GCCGGAGATT TTGGAAAACA AACGTATGTT CAACCAATAC
CCGAAACTTG TCACGGGCCT TGCGAGCGAG TTGTTCACGG TGGACGGCAA GCCGCCGGCA
CGGCTTGCCC GGAAAATTTA CGACCGGATC CGGGCGAGCG GAATCGGCCT GGGGCAACTG
GCCCTCGACG GCTGGAAAGG AGCGAGAGGC CTGTGA
 
Protein sequence
MAEDKTTAIV VGAGPAGSTA AYLLAREGHE VILVERGTAP GCKNMYGGRM YSHALNRIIP 
EFWTEAPVER CVERELITFL DGERSVSVAC RDSEWAGPGC HSFTLLRAEF DAWLAAKAEE
AGALLACGIR VDDLVFENGR VVGIRAGEDE MMADVVIAAD GVNSVLARKA GLAGPFSARQ
VATGVKQIIE LPAQTINERF QVDDFHGAAQ LFVGDCSGGV QGGGFLYTNK NSISLGLVFN
VAELSRCRMK PAEALEDFKS SPHIAPLIEG GREAEYSAHL VPEAGLGMMP ELFGDGILVA
GDAAGFVLNL GYTVRGMDFA VASGEAAARA VMEAKAHNDF SRNGLCRYRE LLRESFVLRD
LEAYRSAPEI LENKRMFNQY PKLVTGLASE LFTVDGKPPA RLARKIYDRI RASGIGLGQL
ALDGWKGARG L