| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3921 |
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| Symbol | |
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| ID | 4457741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 4774933 |
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| End bp | 4776225 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639704694 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_848025 |
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| Protein GI | 116751338 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.439492 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGCC GGAGTGCGCC GGTCGGTCCG CTCCCTCACG GTCGCAACCC GGAAGCCGCC
GTCCGCGGAA AGGATACGAC ATTGTTTTCT CCAGTCCTGA ATAAGCCCGC ACTGGTCCTG
GCGGCCCTGC TTCTGGCGGG AGTAATGTCC GGCTGCGAGC GACAGAACCA GTATGTCGCG
CCTCCGCCGC CGGCCGTCAC CGTGAGTCAG CCTTTGAAAA AAGAGGTGAC CGACTACCTT
GAGTTCACCG GGACGACCCA GGCGGTCGCT ACCGTCGATA TTCGCGCCCG GGTCCAAGGC
TTCCTGCAGA CCGCCACCTT CAGGGAAGGC GCTTTCGTCA AGAAGAACGA TCTGCTCTAC
ATCATTGATC CCAGGTCCTA CCAAGCCGCG GTGGACAAGG CCGTGGCCGA TCTGGCCGAC
AAGAAGGCCC AGGCGGAGAA GGCCGAAGTC GAGCATCTTC GCAATCAGAG GCTTTTCAAG
GAGAATGCCA CCTCCGAGAA GGAACTGGTC AACGCCAAGG CGGCCCGGGA TTCCGCCAAA
GCCAATGTCG CGGCCGCGGA AGCGAGCCTC GAGGATGCCA AAATCAACCT GGGTTATTGC
TCGATTTACG CTCCGCTCAG CGGACGCATC GGCCGGAACC AGGTGGACAT CGGCAACCTG
GTGGGGGCGG GGGAGTTCAC TCTCCTTACG ACCATCAAGC AGTACGACCC CATCTATGCC
TACTTTACGC TCAACGAACG GCAGCTCCTG AGGCTGATGC GGCTGGCGCG CAAGGGCCGG
GAATATGCCG TTCAGGACAC GGTCATCCAC ATGGCGCTGG CCAACGAGAA CGGGTATCCG
CACGAGGGAA GGCTGGACTA CGCGGACCTC GGCGTGGATC AGAGCACCGG GACCATGCTC
ATGCGCAGCG TCTTTTCGAA TCCGAATCCT CCGGCCATTC TGCCCGGCCT GTTCGTGCGG
CTGCGCGTGC CGGCCGGGGT CCGACCCGGC GCGCTGCTGG TGAGCGAGCG CGCCATCGGG
TCCGACCAGG GCGGTCAGTT CGTGCTGGTT GTGAACTCGG AGGATATCGT CGAAATGAGG
CGGATCGTTC CGGGTAGCGT GACGGACGGC ATGCGCGTCA TAGAGGAAGG TCTCAACGGC
GATGAGTGGA TCGTCGTCAA CGGCATTCAG CGGGCCCGCC CAGGGGCCAA GGTCAAGCCG
ACGCGCGTCG ATTCCGTTGC GCGCGACGCG GCGGCCGGCA CTCCGTCCGG CAGCGCCCCG
AACACAGCCG CGAGTCCGTC GGCCAAACCG TGA
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| Protein sequence | MTRRSAPVGP LPHGRNPEAA VRGKDTTLFS PVLNKPALVL AALLLAGVMS GCERQNQYVA
PPPPAVTVSQ PLKKEVTDYL EFTGTTQAVA TVDIRARVQG FLQTATFREG AFVKKNDLLY
IIDPRSYQAA VDKAVADLAD KKAQAEKAEV EHLRNQRLFK ENATSEKELV NAKAARDSAK
ANVAAAEASL EDAKINLGYC SIYAPLSGRI GRNQVDIGNL VGAGEFTLLT TIKQYDPIYA
YFTLNERQLL RLMRLARKGR EYAVQDTVIH MALANENGYP HEGRLDYADL GVDQSTGTML
MRSVFSNPNP PAILPGLFVR LRVPAGVRPG ALLVSERAIG SDQGGQFVLV VNSEDIVEMR
RIVPGSVTDG MRVIEEGLNG DEWIVVNGIQ RARPGAKVKP TRVDSVARDA AAGTPSGSAP
NTAASPSAKP
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