Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3920 |
Symbol | |
ID | 4457740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 4773507 |
End bp | 4774241 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639704693 |
Product | putative metal-dependent hydrolase |
Protein accession | YP_848024 |
Protein GI | 116751337 |
COG category | [R] General function prediction only |
COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.39883 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAAGG CGCTGACTCT GGTGTTGTTC CTCGTTGTGG CGGTCTTTCC CGATGCGGGC GCGCAGCAGG TGGAATCGGA CAGATTCGAG ACCGCCGCGG GTCCGCTGTC CGTTCAGTTT CTCGGGCACG GCAGCCTTGC CTTCCAATTT GCCGACAAGG TCATCTATGT CGACCCCTAC AGCGAAGTCG CCGAGTATTC CAAGCTGCCC AAAGCCGACA TCGTTTTCAT CACGCACGAA CATAAGGACC ACTTCGATCC GAAGGCGCTG GGGCACATCG TTACGGACAA AACTCTGGTC GTGTTGACCG AAACCTGCGG TCGGCAGTAC CAGGAAGGCC TGGTGATGCA CAATGGGGAT CTGAAGACCA TTCAGGGCAT CACGGTGGAG GCGGTCCCGG CCTATAACAT CGTGCACTTG AGGCCGTCCG GCTTCCCTTA TCACGCAAAA AGCTTCGGCA ACGGCTATGT GTTCACCTTC GGCGAAAAGA GGGTTTACGT GGCCGGCGAC ACGGAAAACA TTCCGGAAAT GAAAGACCTG AAGAATATCG ACATCGCCTT TCTGCCGATG AACCTGCCCT ATACCATGAC GCCCGAGATG GTCGCCGACG CCGCCCGGAT CATCAGGCCC CGGATTCTTT ATCCCTATCA TTACGGTGAG ACCGACGTCA CGCAGTTGAT CGGTTTGCTC AAGGATGAAA AGAGCATCGA GGTGCGCATC CGGAATCTGA AGTGA
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Protein sequence | MTKALTLVLF LVVAVFPDAG AQQVESDRFE TAAGPLSVQF LGHGSLAFQF ADKVIYVDPY SEVAEYSKLP KADIVFITHE HKDHFDPKAL GHIVTDKTLV VLTETCGRQY QEGLVMHNGD LKTIQGITVE AVPAYNIVHL RPSGFPYHAK SFGNGYVFTF GEKRVYVAGD TENIPEMKDL KNIDIAFLPM NLPYTMTPEM VADAARIIRP RILYPYHYGE TDVTQLIGLL KDEKSIEVRI RNLK
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