Gene Sfum_3908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3908 
Symbol 
ID4457763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4758768 
End bp4759874 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content64% 
IMG OID639704681 
Producthypothetical protein 
Protein accessionYP_848012 
Protein GI116751325 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0872501 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGGA ACCTTCATCC TGTCGGAGGC CGAACAAACG TTCACCGGCG CGCATCGCGG 
CCCGGCTCCG CCTTCCCTCC GCATTTCGGA CCGTCTCCGG CAAACCCCGG ATTCCCGCCA
TCGCCTGCAA GCGCGCCCTG GGGAACGCGA GGTGCTCCCA TCTGCCGAAC GGATGAATCG
ATGCGAACGA AGTGGTGTTT CCCAAGGTTT GAGGCGTGGG CCGCGCTGGT GCTGGTCCTG
GTCTTCCTTT CCGGCGCCGC GGCGGCGCAG TCCCGGACCT TTGCCGTCAT CGCCGACAGC
CGCTCCGAAC ACTCCCGCCT GCGCAACGTG CTCGAGGAAG TCCGCGACAT GAAAAACGGC
GCAATTGCGG ACATCGCCGG GATCGGAATC GTCATCGCCC TTGGCGACAT CGATCCGGTC
TCGCAAACCC GCACGCTTTA CAGGGAGGTT TTCCAGGCCG ATGCCCCTCC ACTGCTCCCG
GTGCGGGGCA ACCACGAGAA ACCCGCGGAT GTCCGGGTCA TTCTCGAAGA CATGCTCCCG
GCGCTGACGC CGTCCGTCAA GCTCCACGTT CCCGGAACCG TCAACTATGT CTTCGACTGG
AACGACGCCC GGTTCATCGT GCTCGACCAG TATTCGGAAT TCGCCCGCAA TCCGCACGGT
TCCGCCGTGC TGGAATGGCT GGAGAACGCC ATCGTCACGG CTCCGGACGC CCGGCATGTC
TTCGTCTGCC GTCACGAGCC CTACATTCCG GACGATCCCC GCAACGATCC CTTCTGGAGC
GTGCTCCTCA GGCACAACGA GAAGGTGCGG GCATTTTTCG CGGGGCACAC CCACGTCTAC
AATCGCCGCA GGATTCCGGA TGAGCCGGGC GGCATTCCGT ACGTCAACGT TGGAAACGCC
GGCCAGAGAA GCCACAACGA CCTGAAGCAA ACCATCGTGG CCGTCACGAT CGGGGAAGAC
CGGGTTTCCT TCAGAGCGGT TCAAACCCCG ACGGGCACGA AGGCGTTCCG GACGACGGAC
CGGTTTCAGG TGACGATCCC TCGGCGCCCG GAATATGGCC GGCAGTCACC CGCGGAGCAG
CCGCGGGAGT ACCCCGCCAT CGACTGA
 
Protein sequence
MRRNLHPVGG RTNVHRRASR PGSAFPPHFG PSPANPGFPP SPASAPWGTR GAPICRTDES 
MRTKWCFPRF EAWAALVLVL VFLSGAAAAQ SRTFAVIADS RSEHSRLRNV LEEVRDMKNG
AIADIAGIGI VIALGDIDPV SQTRTLYREV FQADAPPLLP VRGNHEKPAD VRVILEDMLP
ALTPSVKLHV PGTVNYVFDW NDARFIVLDQ YSEFARNPHG SAVLEWLENA IVTAPDARHV
FVCRHEPYIP DDPRNDPFWS VLLRHNEKVR AFFAGHTHVY NRRRIPDEPG GIPYVNVGNA
GQRSHNDLKQ TIVAVTIGED RVSFRAVQTP TGTKAFRTTD RFQVTIPRRP EYGRQSPAEQ
PREYPAID