Gene Sfum_3906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3906 
Symbol 
ID4457761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4756403 
End bp4757653 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content62% 
IMG OID639704679 
Productglycosyl transferase, group 1 
Protein accessionYP_848010 
Protein GI116751323 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0901376 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCTTCG GAACCAACCG CCTGGGGATG CTCCTCAAGG GTTACCCGCG CATATCGGAA 
TCCTTTATCA GCACGGAAAT CCTCCTGCTC GAGTCGCTCG GCGTTCCCAT CGAGATCTTT
TCCCTGAGGC AACCCAGGGA AACCTTCTGC CACGATCATG TCACAAAGAT CGCGGCTCCC
GTGACTTATC TGCCCGAATA CGTTCTGCCC AACCTGGCCA CCCTGTTCCG CAGCAACATG
AGGCTCTGGC GCACGCTCGG CGCTCACTAC CCGGGATGTT TTCGGGATGC GCTCAAGCGG
GCTTATGAAC GCCGCGCCGT CGCCACGGTC AGGCATTTCC TGCAGGCCGG CCATCTTGCG
ACGACGCGGC TGGCGGGGTC GAAGGTCTCG CACATTCACG CCCACTTCTG CCACACGCCG
GCGTCGGTGG CGTTTTTCGC CTCCGGGCTG ACCGGTCTTC CCTTCAGCTT TACGGCGCAC
GCCAAGGACA TCTACACGTC CGATCCCGAA CAGCTTTCCC GAAAAATCCG CAGGGCCCGT
TTCGTGGTCA CCTGCACCCG ATACAACGCC GCGCACCTGG CGCAAATCGC GGGCGATGCG
GCGATCCGGA CCCCCATCCA CACGATCTAT CACGGAATCG ATCCGGAGCT TTTCGCGTTC
GGAACCGAAG CTCCCGCCGG GCCTCCCTAC GAGATCCTGT CGGTGGGGCG AATGGTGCCC
AAGAAAGGGT ATGACGACCT CCTTCTGGCA TTGAAAATCC TTGACGGGGA GGGCTTCGAT
TTCCGGTTCA CCCACATCGG TTCCGGTGAA GAAAAACCCC GGCTCAAAAC ACTGACCCGA
GATCTCGGTT TGTCACCGCG GGTTCGAATG CTGGGGACAC TGCCCCACCG GGACGTGATC
GATCGGTACC GCCGGGCTCA TTGTTTTGCC CTGGCCTGCA AGGTTGCCGA AAACGGGGAC
CGGGACGGAA TCCCCAACGT CCTGATCGAA GCCATGGCAG TGGGGCTGCC GGTGGTTGCA
ACCGCCGTCT CGGCCATTCC CGAGTTGGTT GAAAACGGGA AAACCGGAAC GCTGGTGGAG
TCGGGCAATC CGGCGGCCAT GGCCCGGGCA TTGCGGCGGG TGCTGGAGAA CCCGGAACAG
CGGATGCCCA GTGTGACGGC GGCCAGGAAA CGCGTCGAAG AAGACTTCGA CAACCGCCGC
TGCATCCTGA AACTGCATGC GCTCTTCAAG CGGGTCCTGG ACGCTCCGTG A
 
Protein sequence
MSFGTNRLGM LLKGYPRISE SFISTEILLL ESLGVPIEIF SLRQPRETFC HDHVTKIAAP 
VTYLPEYVLP NLATLFRSNM RLWRTLGAHY PGCFRDALKR AYERRAVATV RHFLQAGHLA
TTRLAGSKVS HIHAHFCHTP ASVAFFASGL TGLPFSFTAH AKDIYTSDPE QLSRKIRRAR
FVVTCTRYNA AHLAQIAGDA AIRTPIHTIY HGIDPELFAF GTEAPAGPPY EILSVGRMVP
KKGYDDLLLA LKILDGEGFD FRFTHIGSGE EKPRLKTLTR DLGLSPRVRM LGTLPHRDVI
DRYRRAHCFA LACKVAENGD RDGIPNVLIE AMAVGLPVVA TAVSAIPELV ENGKTGTLVE
SGNPAAMARA LRRVLENPEQ RMPSVTAARK RVEEDFDNRR CILKLHALFK RVLDAP