| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3902 |
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| Symbol | |
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| ID | 4457757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 4752829 |
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| End bp | 4753497 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639704675 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_848006 |
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| Protein GI | 116751319 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.658938 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.144736 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCGAAG GTTTGATTGC GGTCATAAAT GCTCTGCCTT ATATGCTCGA GGGTTCGCTG
GTCACCGTGG TCGTGGTCGT CGGCGCGATG GCGCTGGGTC TCGTTCTGGG AATTCCTTTC
GCCGTCGGCC AGGTATACGG CGGGCCCGGC GTGCGCCTCG CAATCGCAGC CTATGTCTGG
TTCTTTCGCG GAGTTCCCCT GCTCGTTCTG CTCTTCCTGT TTTATTTCGG TCTCTGTTCG
CTGCTCGATT TGAACCTGTC CGCTTTCACC GTCGCCATTA TCGTTCTGGG CAGCATCAGT
TCGGCCTATC AGTCCCAGAT TTTTCGCGGC GCGATCCTGT CGCTCCCCGA AGGCCAGCTC
AAGGCGGCAA GAGCCCTGGG AATGAGCGAT GCGAAGGCGG TCTTTTTCGT GATTCTGCCC
CAGGCGCTTC GACTGTCGAT CCCGGGCTGG TCCAACGAGT ACTCCATCGT TCTGAAGGAT
TCGGCCGTGA CCTATGCTCT CGGAGTGGCC GAAATAATGG CCAGGACCCA CTTCGTGGCC
ACCCGGACCT ATCAGCACCT GCCGCTCTAC ATGGCCGCCG GCGCCATCTA TCTTCTGTTG
ACTTATGCGG GCGTGAAAGG GCTGAGGCTC CTGGAATCCA AAGTGAGGAT AAAGGGCTAC
GGCCGCTGA
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| Protein sequence | MPEGLIAVIN ALPYMLEGSL VTVVVVVGAM ALGLVLGIPF AVGQVYGGPG VRLAIAAYVW
FFRGVPLLVL LFLFYFGLCS LLDLNLSAFT VAIIVLGSIS SAYQSQIFRG AILSLPEGQL
KAARALGMSD AKAVFFVILP QALRLSIPGW SNEYSIVLKD SAVTYALGVA EIMARTHFVA
TRTYQHLPLY MAAGAIYLLL TYAGVKGLRL LESKVRIKGY GR
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