| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3896 |
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| Symbol | |
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| ID | 4457786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 4746402 |
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| End bp | 4747637 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639704669 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_848000 |
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| Protein GI | 116751313 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0538] Isocitrate dehydrogenases |
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| TIGRFAM ID | [TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.16256 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGATC ACAGGGGAAA TGGGACGTGG ATCGATTTGG ACCGGGATCG TAACCTGGTG
GTGCCGCCCG ACCCGATCAT CGGGTTCATC GAGGGCGACG GCATCGGACC CGATATCTGG
GCCGCCACCC GACTGGTGCT GGAGTCCGCG GTCCGGAGGG CCTACGGCGG GTCGAAACGG
ATCCGCTGGC ATGAGCTTGC AGCCGGCGAG AAGGCCCTCG CGGCCGTCGG CGAGCCCCTC
CCCCAAATCA CGTTCGACGA AATCCGCAAG TGCGTGGTGG CCATCAAGGG GCCGCTCACC
ACTCCGGTCG GCAAGGGATT TCGCAGCCTC AACGTCACAT TGAGGCAGGT GTTGAACCTC
TACGCCTGCG TTCGGCCAGT GCGGTATTTC CCGGGATTGC CCTCCCCGGT CAAGCACCCC
GAAAAGGTGA ACATGATCGT GTTCCGCGAA AACACCGAAG ACGTTTACGC CGGAATCGAA
TGGGCGTCGG GATCGAAGGA GGCCCGCCGC CTGGAAGCCA TCCTGAAGGA GGAGTTCAAG
GTTTCGCTGC CCCCGGATTC GGGCATCGGC ATCAAGCCCA TCAGCCGCGC GGGAACCCAG
CGTTTGGTAC GGCGGGCGAT CCGGTACGCC ATCGAAAACG GGTTGCCTTC GGTCACGCTG
GTCCACAAGG GCAATATCAT GAAGTACACC GAAGGGGCGT TCAGGAACTG GGGCTACGAG
CTGGCCGCCA CGGAATTCGC CGATCTCGCG GTGACCGAGA CCGACCTGGA GCAGAAGCAC
GGCGGGCACG TCCCGGAGGG CAAGGTGGTC ATCAAGGACC GCATGGCCGA TTCCATGTTC
CAGCAGGTGC TCCTGCGCCC CGAGGAATAC AGTGTCATCG CGACTCCGAA CCTTGACGGC
GATTACCTTT CGGACGCTCT GGCCGCGCAG GTCGGAGGGC TCGGCATGGC CCCCGGCGCA
AACATCGGCG ACGAATGCGC GGTCTTCGAA GCCACGCACG GGAGCGCTCC CAAGTACGCG
GGTCTGGACA AGGTCAACCC CGGTTCACTC ATCCTTTCGG GCGTCATGAT GCTCGAGCAC
ATCGGCTGGC GGGAAGCGGG GAAGCTGATC GAGGATGCGC TTACGCGCAC CATCCAGGCG
GGTGTGGTGA CCTACGACCT CGCCCGACAG ATGGACGGGG CCAGGGAAGT CAGGTGCTCG
GAGTTCGCCC GGGCCGTCGT GGAGCGCATG GATTAG
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| Protein sequence | MTDHRGNGTW IDLDRDRNLV VPPDPIIGFI EGDGIGPDIW AATRLVLESA VRRAYGGSKR
IRWHELAAGE KALAAVGEPL PQITFDEIRK CVVAIKGPLT TPVGKGFRSL NVTLRQVLNL
YACVRPVRYF PGLPSPVKHP EKVNMIVFRE NTEDVYAGIE WASGSKEARR LEAILKEEFK
VSLPPDSGIG IKPISRAGTQ RLVRRAIRYA IENGLPSVTL VHKGNIMKYT EGAFRNWGYE
LAATEFADLA VTETDLEQKH GGHVPEGKVV IKDRMADSMF QQVLLRPEEY SVIATPNLDG
DYLSDALAAQ VGGLGMAPGA NIGDECAVFE ATHGSAPKYA GLDKVNPGSL ILSGVMMLEH
IGWREAGKLI EDALTRTIQA GVVTYDLARQ MDGAREVRCS EFARAVVERM D
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