Gene Sfum_3893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3893 
Symbol 
ID4457783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4744000 
End bp4744914 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content56% 
IMG OID639704666 
Producthypothetical protein 
Protein accessionYP_847997 
Protein GI116751310 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.600178 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.152326 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACAAC ACGACTACGC CAAATGCATC GAAGTCTCAA AACGGGTGCG CTGGGACATA 
GACAAGGATG TGATCCGGCA GAGAGAGTTC GACTTTTCCA AAAAATTCCT CCCCGACGGC
ATCTCCAAGG TCGATCGACT CGATTTTTTG AGCCAGGACC AAAAGAGGTT CCTTAGTCAG
ATCCAGGGCA GGACCTATGC CAACATGTTT GGATTTGTCG AGCGATTCAT CGTTGCCAAG
ATCCTTGAGA TCACCCGTGA CCACTGGCTT GACGATCAGG TCGCGCTTGA AGCTCTCATA
CGCTTCTGTG ACGAGGAGCT CAAACATCAG GAGCTGTTCA GAAGGATTGA GCCGATGATT
GCTTCCGGCA TGCCCCCCGG GTATCGCTTC CTTTCCGATC CGAACCAGGT CGCAGCCGCA
GTTCTGGAAA ACTCAACATG GGCCGTACTG GGACTGATCC TTGAGATCGA GCTCTTCACC
CAGGAGCACT ACAAACAGAG CATCGAGCCC GATGAGGACC TCTCGGAGCT CTACCGGGAC
ATCTTCCAGT TCCACTGGAA GGAGGAGACC ACCCACGCCA TCATGGATGA ACTGGAGTGG
CCCCGCGAAG ATAAGAAACT GACCCCGGAG GAGCGGGAGC GTTCCATCGA TGAACTGATC
GGACTTGTGG GCGCAGTGGA CGGCATACTG CAGTCGCAAA GCGCGGCGGA CCTGGAGTAC
TTCCTTGGAG CAGGCGGGGT CACTCTGCAT GCAGAAGAAG CCGAGATTAT AAGGGCGGGC
GTTCTCAATG CGTACCGGTG GCAGTATATC TTGTCCGGCG TGGACCATCC CCGATACCGG
GCCGCTCTGG GAAACCTGAT CACTGAGGCA CAGGCCTGGC GTATCAATGA TGCCCTCGCG
GCACTTCGCA GCTGA
 
Protein sequence
MRQHDYAKCI EVSKRVRWDI DKDVIRQREF DFSKKFLPDG ISKVDRLDFL SQDQKRFLSQ 
IQGRTYANMF GFVERFIVAK ILEITRDHWL DDQVALEALI RFCDEELKHQ ELFRRIEPMI
ASGMPPGYRF LSDPNQVAAA VLENSTWAVL GLILEIELFT QEHYKQSIEP DEDLSELYRD
IFQFHWKEET THAIMDELEW PREDKKLTPE ERERSIDELI GLVGAVDGIL QSQSAADLEY
FLGAGGVTLH AEEAEIIRAG VLNAYRWQYI LSGVDHPRYR AALGNLITEA QAWRINDALA
ALRS