Gene Sfum_3892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3892 
Symbol 
ID4457782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4742626 
End bp4743918 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content55% 
IMG OID639704665 
Producthypothetical protein 
Protein accessionYP_847996 
Protein GI116751309 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.242927 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0835351 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGT TTGCTTTTCC TCCAGGCTAT ATAGACATGC AGCGATTTGG CCTGATCGAT 
GCCATTCTTG GACGCCGCTC CCGTCGATTC TTCATGGGAG CAGAGATCCC GGACGGTCTA
TTTGCCTACA AATCGCGCCA TGAGGCCGTG CCGCTCTCCG AGCTTGAAAA GCTCCTGGTC
GTCATGGCCT GCGGGGGAAA CAACAGCTGG CATTACATGA TATACCGCGC CGCCCGCTAT
GCGCCTTACC TGTCAAACTA CGCCGGCGCT GCCGGGGGGC GCACCTTTCC TTCCTCGGCG
GGGTTCCATA CGAGCAGAAC TTTTTTCACC GATGATGAAG GGGTCTATCT TCTCGACGCC
CGTGACACTC CAGCTTTTGC GGAGCGGGAT GAAGATGGCT CTCTGGAGCC CGATGTTCTC
CTCGAAGTGC TTCAACACCA TGTGCGGAGG CTGGAAGATG GGCGCATGCT ACTCCCACCT
GAAGTACCGT ATGTGGAAGC TCACAACACT TGGGTGGTCA ATCATCCGGG AACACTTCTC
GTGATTCCGG TAGGGGACCT TGCCCAGCAC ACTCTCCTCA ATCTCTGTTA CATGCTTCAG
AATGGCCTCG TCGTAACTGA TGACATCAAC AAAAAGTCTA TCCCCGGAAT CGAGAAATTC
AAAGATATTG TCGATGTGAA CAACTGCTGG CCCCTTACTT TTGTAGAGCA GATGTCCTTA
GCCGAGCTTA CCGCGGAGCT TTCGACCAGT TGCTATGCAG GAGCCCTGAC TCTTCAGGCC
ATGGGGCTCG GGGGGTGGAT GTTCAATGGA ATCGATCCTT TCAGCATCCT TGGAGCAAGC
GGCAATCCAT CCGTGCCGGG CCTGAGATTT CGGTACGACA TGGATGAGCG CTGGCCCTAC
CCCAATCCGA CCGGGCTAGA AGGAGTGATG GAGGGGTTCT GCCCTCCACA TTATCCCGAT
ATGCGCGCTG CTGTGGAGGC GATCTGCGAA AGGAAATTCG GTCCCGGAGG GCCTTTCAAC
CCGCAGACTC CGGGACCGTG GAAGAACTCC GCCAAGGTCC GTTCCGCGGC CGAGGTTCAC
ACGGAGTCAT TTCGTGAATG CGTAGCCTTT CAGGCTCAGT ACATCTGTAA CACCTTCGGC
AAGTTTCCGG GAACCACTCC TTCCATCTTT GCTGTTGTGT ACCTTCAGGC GCATCATCTC
GATCTGGAGT TCTATGACAC CTTCTACAAG CCTGGCGCCT ATCTGTCGAC TCATGCTCAG
CACATGACCA GGTGGCACCC TGAAGGAGAT TAG
 
Protein sequence
MKTFAFPPGY IDMQRFGLID AILGRRSRRF FMGAEIPDGL FAYKSRHEAV PLSELEKLLV 
VMACGGNNSW HYMIYRAARY APYLSNYAGA AGGRTFPSSA GFHTSRTFFT DDEGVYLLDA
RDTPAFAERD EDGSLEPDVL LEVLQHHVRR LEDGRMLLPP EVPYVEAHNT WVVNHPGTLL
VIPVGDLAQH TLLNLCYMLQ NGLVVTDDIN KKSIPGIEKF KDIVDVNNCW PLTFVEQMSL
AELTAELSTS CYAGALTLQA MGLGGWMFNG IDPFSILGAS GNPSVPGLRF RYDMDERWPY
PNPTGLEGVM EGFCPPHYPD MRAAVEAICE RKFGPGGPFN PQTPGPWKNS AKVRSAAEVH
TESFRECVAF QAQYICNTFG KFPGTTPSIF AVVYLQAHHL DLEFYDTFYK PGAYLSTHAQ
HMTRWHPEGD