Gene Sfum_3891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3891 
Symbol 
ID4457781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4741442 
End bp4741819 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content56% 
IMG OID639704664 
Productdesulfoferrodoxin 
Protein accessionYP_847995 
Protein GI116751308 
COG category[C] Energy production and conversion 
COG ID[COG2033] Desulfoferrodoxin 
TIGRFAM ID[TIGR00319] desulfoferrodoxin FeS4 iron-binding domain
[TIGR00320] desulfoferrodoxin
[TIGR00332] desulfoferrodoxin ferrous iron-binding domain 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.79763 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.067434 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAA GGATGCAGGT TTTTAAATGC GAGTTGTGTG GAAACATCAT CGAGGTGCTG 
CACGGAGGCG CCGGGGAGTT GGTGTGCTGT GGACAGCCGA TGAAAGTGTT TGTTGAGAAT
ACGGTGGATG CGGCAAAGGA AAAACACGTT CCGGTGCTGG AGAAATCAGC GGCGGGAATC
AAGGTCAAGG TGGGCGGAGT TCCCCATCCG ATGGAAGAAA AACACTACAT CGAGTGGGTG
GAACTGATCG TGGGAGACAA GATTTACCGA CAGTTCCTGA AGCCGGGCGC CCCCCCCGAG
GCCGTTTTCT CCGTCGACCC GTCCGGGCCT GCTGTGGCCA GGGAATACTG CAATCTGCAC
GGACTGTGGA AAGGCTAG
 
Protein sequence
MAERMQVFKC ELCGNIIEVL HGGAGELVCC GQPMKVFVEN TVDAAKEKHV PVLEKSAAGI 
KVKVGGVPHP MEEKHYIEWV ELIVGDKIYR QFLKPGAPPE AVFSVDPSGP AVAREYCNLH
GLWKG