Gene Sfum_3879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3879 
Symbol 
ID4457804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4732111 
End bp4732614 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content57% 
IMG OID639704652 
Producthypothetical protein 
Protein accessionYP_847983 
Protein GI116751296 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0345695 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGGA AGGTGTGCGC CGGCTTGCTG CTGTTAGTGC TCGTGGCCTT GCCGTCGTTC 
GCCGCGGGGC AGGACATGTT TCCGGGGCAG TGGTGGCGCC TGCCTCAGGC GGGAGAGATG
TTCGGCCTCA CCGAAAAGCA GAAACTGCAA CTGGACGACC TCTATTTCAA GAACCGCCGG
AACCTTTCGG CTCTGAAAAA AGCGCTGGAA AACGAACGGG CCAGGTTTTC GGCCGTCATG
GAACGCGAAC CGCTCAACGA GGCGGCGGTC ATGGCTCAAT TCGGCAGGCT CGAGGAAGCC
AGGACGCAGC TCTCCGCCGA AAGAGTGCAT TATATACTCG AGCTTCGGAA GTTGCTCGGC
CAGGAGCGAT TTCAACGGGT GAAGACCTAT TTCAGCAAGT TAAGAGACAA GAAGAGCAAA
ATGACCGGGA CCTACTCCCC TTATCCCACC AAGAAGCGAG GGGTCATCAT GAGCCCCTGG
GGGATCACGA TTCAGAGAAG ATAG
 
Protein sequence
MLRKVCAGLL LLVLVALPSF AAGQDMFPGQ WWRLPQAGEM FGLTEKQKLQ LDDLYFKNRR 
NLSALKKALE NERARFSAVM EREPLNEAAV MAQFGRLEEA RTQLSAERVH YILELRKLLG
QERFQRVKTY FSKLRDKKSK MTGTYSPYPT KKRGVIMSPW GITIQRR