| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3872 |
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| Symbol | |
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| ID | 4457797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 4724187 |
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| End bp | 4725848 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639704645 |
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| Product | phosphoesterase domain-containing protein |
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| Protein accession | YP_847976 |
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| Protein GI | 116751289 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0907106 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCGAC CGCAATGGGT GATCTCCGCG CAGGAAAAAC CGGAATCGGT CCGTGACGTG
GTGCGGATTC TGCTGGCCAA CCGGGGAGCC GGGCCGGCAT TTCTCGACGG GACCCTCAAA
GAGCTGGAGA CCTGTCTTGC CATTCGAGGC ATGGATGCCG GGGCCGAGCT CATGGCCGAA
CACCTCGCCG CCGGAACCAG GATCGTGCTC GTGGGCGACT ACGATTGCGA CGGGATCACC
TCTCTGGCCC AGGTTTCCCT GTTCCTGCGA GAGATCGGCT ACGGGAATTT CGAAACGGTG
GTCCCCCGGC GCTCGGAAGG CTACGGGATT CCGGAGAGGG CGATTCTCGA CCACCCCGAC
GCGGGGCTCT ACGTCGCCAT GGACTGCGGG ACTCTGGATC GCAAGGCCGT GGGAATGGCC
CGCGAGAGGG GGGCCGATTG CATCGTGATC GATCATCATG AAGTGCCCGA TCAGGGATTG
GCCCCGGCGA CGGTACTCAT CAACCCGAAA CACTCGGAAT GTGAATCGAC CTTCAAGGAG
TTCTGCTCAT CGGGCCTCAC GCTCCTTTTC CTGGCAAGGC TTCGCCGGGC ATTGAGGGGT
TTCCCCAAGC CTGCGCTGGG CGGAAGATTT CTCATTCTTG CCGCCATAGC GACGGTTGCC
GATATGGTGC CCCTGGTGGA AGGCAATCGA ATCCTCGTAC GCAGCGGCCT CAACTGCGCG
AACCAGGTTG ACTATCCACC CCTGGACCAA CTGGTTCAAA AAGCGGGGCT TTCAGGGAAG
TCCATCACGG CCGGGCACCT GGGGTATTAT ATCGGCCCGA GAATCAATGC GGCCGGGCGA
ATGGCGGACG CTCGCACCGC CTACGAACTG CTGGTCGAGG ACGATCCTTC GGCTGCCGCT
CGACTGGCCG AGCAGCTCAA TCGGTACAAT ACGCAGAGGC AGAACCAGGA AGACGCCGTA
GTGGGCGAAA TCAGGCAGCG ACTCGCGGAC CGGAAGGTTT TCGGGAGGAC GCTGGTGATG
GCCGATGCCG GCTGGCCGGC GGGAATCATC GGGATCGTCG CATCGAGAGT CCAGCAGGAA
TTTCACTACG GTCCGGTGGT CGTGTTTTCC GTCGATGAGG CGGAGGGGAT CGCTCGGGGC
TCCGCCAGGA GTATTCCGGG GTTCGATATC CACTCGGCGT TGGCTTCCTG TGACGACGTG
ATGCTGCGTT GGGGAGGCCA TAAGATGGCG GCGGGCATGA CCATCGCCCT GGACCGAATG
GACGAATTCG CACACCGGTT CGAGGAGAGC GCCCTGCATT GGCCGGCCCA CGTCTTCCAG
CCCCGCGGCA GGGTGGACGC GGAGCTCGAC ACGGGTTTGA TTTCCGTCGA CCTCTACCGG
GAACTGACGA AACTGGAACC GCACGGTCTG GGCAACCCGA CGCCGACCTT CGCTTCACGG
GGAGTCAGAG TGCAGGTCAA GAAGACGTTC GGCCGGGACG CAAGCCACCT GCGCCTCCAG
CTCGACCAGC GCATCGGCGG AGTGTTCTGG CGCGGGGCAA GGCATTTCCG ATCGGCTGGA
TTGAGAGACG GCGAAACGAT GGATGTGGTC TACCAGTTGG ATTGGGACGA CTACGCCGGT
CGCCCCGTCA TGCAGGTGAG GGATGCCGGG CGCCTGTTCT GA
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| Protein sequence | MIRPQWVISA QEKPESVRDV VRILLANRGA GPAFLDGTLK ELETCLAIRG MDAGAELMAE
HLAAGTRIVL VGDYDCDGIT SLAQVSLFLR EIGYGNFETV VPRRSEGYGI PERAILDHPD
AGLYVAMDCG TLDRKAVGMA RERGADCIVI DHHEVPDQGL APATVLINPK HSECESTFKE
FCSSGLTLLF LARLRRALRG FPKPALGGRF LILAAIATVA DMVPLVEGNR ILVRSGLNCA
NQVDYPPLDQ LVQKAGLSGK SITAGHLGYY IGPRINAAGR MADARTAYEL LVEDDPSAAA
RLAEQLNRYN TQRQNQEDAV VGEIRQRLAD RKVFGRTLVM ADAGWPAGII GIVASRVQQE
FHYGPVVVFS VDEAEGIARG SARSIPGFDI HSALASCDDV MLRWGGHKMA AGMTIALDRM
DEFAHRFEES ALHWPAHVFQ PRGRVDAELD TGLISVDLYR ELTKLEPHGL GNPTPTFASR
GVRVQVKKTF GRDASHLRLQ LDQRIGGVFW RGARHFRSAG LRDGETMDVV YQLDWDDYAG
RPVMQVRDAG RLF
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