| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3870 |
|---|
| Symbol | |
|---|
| ID | 4457795 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 4722723 |
|---|
| End bp | 4723286 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639704643 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_847974 |
|---|
| Protein GI | 116751287 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3963] Phospholipid N-methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0359454 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATACGA TTACGTATTT GAAGAATTTC GTCAAGGACA GGAATGTAGC ATCCATCACA
CCCACCTCTT CGTTCGGCGT GAAAAGAGTC TGCAGCAAAA TCGACTTCGA ACGGCAGAAC
GTGATCATCG AATACGGGCC CGGTACCGGC GTGTTCACGC GATATCTCCT CAAGAACATG
GATGATGCAT CCAGGTTGAT CCTGATTGAG CGCAACAAGA ACTTCGGGTC CATCCTGAAG
AAAAAAATTC ACGACCCGCG GGTGGTGATC GTGAACGACA GCGCTGAAAA CGTACTGGAC
ACGCTGAGAG CGTGCCGGGA ATCCCAGGCG GACTACATCC TGTCGGGCAT CCCGTTCATT
CTGCTCAACG ACGAACTCAA GAATCTCATT CTTTACAATA CCCACAGGGC TCTGAAAAAG
GGTGGAAAGT TCCTGGTCTA TCAAACCTGC TTTCAGACCG ACAATCACCT CAAAGTTCAT
CTGGACCGCT ATTTTCCCAT CGTAAGGTCA AAATACGAGC TGAGAAACAT CCCGCCGCTC
CGCGTCTATG AGGCGATCAA ATGA
|
|---|
| Protein sequence | MDTITYLKNF VKDRNVASIT PTSSFGVKRV CSKIDFERQN VIIEYGPGTG VFTRYLLKNM
DDASRLILIE RNKNFGSILK KKIHDPRVVI VNDSAENVLD TLRACRESQA DYILSGIPFI
LLNDELKNLI LYNTHRALKK GGKFLVYQTC FQTDNHLKVH LDRYFPIVRS KYELRNIPPL
RVYEAIK
|
|---|
| |