Gene Sfum_3864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3864 
Symbol 
ID4457789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4716937 
End bp4718013 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content61% 
IMG OID639704637 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_847968 
Protein GI116751281 
COG category[C] Energy production and conversion 
COG ID[COG1149] MinD superfamily P-loop ATPase containing an inserted ferredoxin domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0345695 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACG AAGTCTATCA TAAGCTGGCC AGGGTGCTCG ACACGCTGCC CAACGGTTTT 
CCGGCGACGA AATCCGGCAT CGAGCTCAAA ATCCTGAAGA AGATCTTCAC GCCCGAGGAG
GCGGACCTCT TCTGCGATCT GAGATTGACG CGGGAGACCG CCGCGCAGAT CGCCAAGCGC
ACGGGCCGCC CGCCGGAGGG GCTCGAAGAG AAACTGGCAT CCATGTGGCG CAGGGGTGAA
ATCGGCGGGG TGAACCTGGG CGGCGTCCTG ATGTTCAAGA TGATCCCGTG GATCGTGGGT
ATTTACGAGT ACCAGATCAA CCGCATGGAT CGTGAATTCG CGGCAATGTG CGAGGATTAC
TCCCGGTACT GGGGGCGTCA GCTCATGAAG CACGGTCCGC GGATCATGCA GGTGGTTCCC
GTCGAGCGGC GGATTCCGGT GAAGCAGGAG GCGCTCACCT ACCAGCAGGT TTCAAATCTT
ATCGAGAACG CCCGGGCGTT CATGGTGAAC GAATGCATCT GCAAGAAACA GCGCGGGCTG
CTCGATCACC CGTGCTCCAA GCCCAGGGAA GTCTGCCTGG CCCTGTCCCC AGTGCCGGGC
GTCTTCGAGG ATCATCCGTG GGGCGGGAGA GTCATCGACA GGAAGGAAGC CTACGAAGTC
CTTCGCAAAG CGGAGGAAGC CGGGCTCGTC CACCTGACCG TCAACGTGCA GAAGGGGCAG
CAATTCATCT GCAATTGCTG CGGATGCTGC TGCGGGATAT TGCGGGCGGT GAAAGTGATG
CCCCGGATAG TCAATTCGCA CTACTGCGCC GAAATCGACC CGGACAAGTG CTCCCATTGC
GGTATCTGCG CCGACGAACG GTGCCAGGTG GAGGCAATCA GGGACGAAGG GGACTTCTAC
CGAATCGTCG GGGACAGGTG CATCGGCTGC GGTCTGTGCG CCACCACCTG CCCGGAAGAA
GCCATCGCGT TGATGCGCCG GCAACCCGAG GAACCGGGAA CGACGCCCGA GACCGAGGAG
GCGTGGATGG AAGAGCGGGC CCGCCAGCGC GGGACCGGCT TCGATGCGTT CAAGTAA
 
Protein sequence
MNDEVYHKLA RVLDTLPNGF PATKSGIELK ILKKIFTPEE ADLFCDLRLT RETAAQIAKR 
TGRPPEGLEE KLASMWRRGE IGGVNLGGVL MFKMIPWIVG IYEYQINRMD REFAAMCEDY
SRYWGRQLMK HGPRIMQVVP VERRIPVKQE ALTYQQVSNL IENARAFMVN ECICKKQRGL
LDHPCSKPRE VCLALSPVPG VFEDHPWGGR VIDRKEAYEV LRKAEEAGLV HLTVNVQKGQ
QFICNCCGCC CGILRAVKVM PRIVNSHYCA EIDPDKCSHC GICADERCQV EAIRDEGDFY
RIVGDRCIGC GLCATTCPEE AIALMRRQPE EPGTTPETEE AWMEERARQR GTGFDAFK