Gene Sfum_3855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3855 
Symbol 
ID4457815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4708568 
End bp4709953 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content58% 
IMG OID639704628 
Producthypothetical protein 
Protein accessionYP_847959 
Protein GI116751272 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.472659 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0399717 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAGC AGGCACAGCC ATCGCCAAGA GAGCATCATT TCTACGTTTC GATTGCCAAG 
TTCCTTTTCC ACCATCCGGA GCATGGCATC GTATCAGTGC GGGACCCGAT CAAGATCAAG
GATGCAGAGC GATACGGGCT CAGCCCACTC ATACTCTATG GGTTGACCGT TGCCGGGTTG
CCCATTCGGT GGATGACCTT CACTCCAGTC GATCAGCCCA GGCCCTTCCT GGATGTTCTT
CTGGAGGCGT GGCGTAACGC CGAGGGCTTG CGTGGCCGAC CGGACATCCT GCGGATCAAC
CGCCATCTCG CGGCGGCCAG CCCTGAACTG GTAGGGGACA TGGCAAAAAT CGGAGTCCGG
GTCGAGGTCG CCGATGCCAA GGAGAAATCC CTTCCAGCTT CCCTGCGCTC AGCCCAGGAC
TCCAGCCGGT GGCTGCTGAG GAAGCACGAC GGAAATGACC GGTCTCTTAC TGGGTCCATT
CAGGCCATTT GCCGGTACGC TCAAGTTGAC CATGATTTCC GTGTCAGGGA TGGCCGCAGA
GGCGGCAATA GCCGCGAGGT TGAAGACAGA ATCCAGCAGT GGCTGACCTT ACCGACACAA
GTGCCGGTGT TAACGGTGAC CGGTGGACTC GACTGGGAAC CCGGTCCATG GCTGTCATCT
TGGGAGACAT CTCTGCCGCC AGACCAGCCC CGATATTTCA ATCACGATGG GTTTGATGGC
TGCACCTGGC TACTGACAGG TGAGAAGGCA GCGGAGGATA TCGTCGAGGA TGATGATTTC
TGGGCCGACA GTGACTATGA CAACGCGGCC GAAATCGCCA AGAACCTTGT GGCGTGCTGG
CCCAACCCGC CTGCAGAGAT TGCCAGGTGT GCCGGGATCA CCCTGCGGGA ACTTCAATGG
TTCACCTCGG GGAAGGCGTC CCTTGACCGG CATGCGCGTT TTGACCTGGA GGTCTTGCTC
GGCATCGAAT ACGACGAGAG GATCGGCAGA TATGTAGAGG CCGGACCTTA TGTCCTGGTG
GCCCACAAAA CACTGGCCCT CAAGGAAGTC TATGAAGGTA TTTCCGGCGG CGGAGATGCA
TGCCCCTGTG AGATTGTCCC TCGCCAGGGA GCAGCAGACC CAAGCTGGCG ATACGTGTTG
ATCAACACAT ATGGAGAGCC CCCGAGCATC GTGATGGCAC CTCGTGGAGC AAAAATCACG
GAGCGCCTTC CGGATTTGCT TATGAATTAT GCCGGTACCA CGTCTGTCGC ACCGGAGTTC
TACCGGGATG TCGTTTCTAC CTGCGCCCGG GCCTGCCGCG AACCTGTCGC CAACATCCGG
GAGATGAAAG ACTTTGTGAA ACGCTACGAA GCGCACTGGG CAAATTGCGC CTGGCAGCCG
GAGTGA
 
Protein sequence
MNQQAQPSPR EHHFYVSIAK FLFHHPEHGI VSVRDPIKIK DAERYGLSPL ILYGLTVAGL 
PIRWMTFTPV DQPRPFLDVL LEAWRNAEGL RGRPDILRIN RHLAAASPEL VGDMAKIGVR
VEVADAKEKS LPASLRSAQD SSRWLLRKHD GNDRSLTGSI QAICRYAQVD HDFRVRDGRR
GGNSREVEDR IQQWLTLPTQ VPVLTVTGGL DWEPGPWLSS WETSLPPDQP RYFNHDGFDG
CTWLLTGEKA AEDIVEDDDF WADSDYDNAA EIAKNLVACW PNPPAEIARC AGITLRELQW
FTSGKASLDR HARFDLEVLL GIEYDERIGR YVEAGPYVLV AHKTLALKEV YEGISGGGDA
CPCEIVPRQG AADPSWRYVL INTYGEPPSI VMAPRGAKIT ERLPDLLMNY AGTTSVAPEF
YRDVVSTCAR ACREPVANIR EMKDFVKRYE AHWANCAWQP E