Gene Sfum_3853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3853 
Symbol 
ID4457813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4706059 
End bp4708047 
Gene Length1989 bp 
Protein Length662 aa 
Translation table11 
GC content58% 
IMG OID639704626 
Producthypothetical protein 
Protein accessionYP_847957 
Protein GI116751270 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0326] Molecular chaperone, HSP90 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000936749 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0170599 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAGG GAATCGGAAC GACCGGCATG GCGGGCAACG ACCATTACAG GATGACCGTG 
GATTTGAACG TCCTGGATCA TCTCGGGATC AATCTCTACA GCAACATCGC CGCAGTGTTG
ACCGAAGCGG TTGCGAACGC GTGGGATGCC GACGCGGAGA ACGTCGAGAT CGGTATAGAT
CCGGACGGGA AGTTCATCGA GATCAAGGAC GACGGTATCG GAATGTCCAT CGAGGACATG
AACACCAAGT ACCTCCGGGT CGGCTATCGT CGCAGGGACG AGGATCAGGA GACCGGTCGC
ACGACCGCCA AGGGACGCCC CGTCATGGGC AGAAAGGGCC TTGGCAAGCT GTCTCTGTTC
TCCATAGCCA ACACGATCGA AGTTCACTCG GCAAAGAACG GCGAGTCCCA TGGACTGAGA
ATGACGATCG ACGGAATTCA CAAGTCGGTC CAGGACAAGG AGCCTTTTTA CAGCCCGGAA
AAGCTGCCTC GGGAGGAAAT ACAAGTCACC AACGGGACCG CGATTCTGTT GAAGGATATC
AAGCGCCAGC GTCTCGGACG CGGAGCCACG GCCTTGCGGA AGCGGCTCGC TCGTCGCTTT
TCCGTAGTCG GAGAGGCGCA CGGATTCAAG ATTCTGATCG ACGGACATCC GATCAGCACG
GCCGATCGGG GCGACTTGCC CATGGTCCAG TTCCTTTGGA GTTTCGGAGA CGAAGAGCCG
GATCTTTCGT CCGCAGGACA GTTGTTGGAG CGGGAGGCCC TTTCGGATCG GCTCGACGCA
TGGGATGGGG ATTGGTCGGT CACCGGCTGG ATAGGGACCG CCCGTTTGCC GAAACAGCTC
GACAGCGACG ATGCGGGCAA CCTGAACAGC ATCGTCGTCT TCGCGAGAGG TCGGCTCTTT
CACGAAAACA TCCTCGACAA GTTGAACGAC GGTCGCCTCT ACACGAAATA CCTCACCGGG
CAAATCGAGG CCGACTTCCT CGATGCGGAC GACGAACCGG ATATAGCCAC GAGCGACAGA
CAGCGAGTTC AGGAGGACGA TCCACGATAT GTTCAATTGA TCGCATTCCT CAGAAAGCAA
CTAACGCAGG TCGAGAAACG CTGGACGGAA TGGCGGCGGC TCCACGAGGT GGAAAAGGCC
AAGGAGACGT CACCGGCCCT GGCCGAATGG TTGGAGTCCC TGCCGGAAGG CTTTCGGAAA
AGTGCCGAAA CCCTGATCGC GAAGCTCAGC GCGTTGCCCG TCGACCAGGA CGAGGACCGG
AAACTCATGT ATCGCCACGG CATCCTGGCG TTCGAGCGTA TGAAGTTGCG GGGCTCGGCC
GAAGAGTTGG CCGCGCATGT TCACGACATA GACAAGCTCC TGGCCATTCT CGCGGACAGG
GACTCCCTCG AGGCTTCGCT TTACCGGGAT ATCGTGAAGT CCCGCCTCGA CGCCATCAAG
GATTTTCAGG GAATAGCCGA CGACAACGCC AAGGAAAGCG TCCTGCAAAA GTATCTGTTC
GATCATCTGT GGCTGCTCGA CCCGGCATGG GAAAGAGCGA CCGCCAGCGA GGTGATGGAG
ACGAGACTCA CCACCGACGG CGTGCTCACG CAGGACATGA CTGAAAAGGA AAGACTCGGG
CGTGTCGACA TCGCCTATCG GACGATGGCC GGAAAGCACA TCATCGTCGA GCTGAAGCGG
GTCAAACGGA AAATGAAGCT CCTCGAACTG CAGGAGCAAG GGCAGACCTA TGTGGACAAG
CTCAAGAAAA TCCTGCTCGC CCAGGGCGAC GCGACTCCGA ACATCGAGGT GGTTTTCGTT
CTCGGTGAGC CCATCGACGA GGAAGGGAGC AACCCGGAGC GATTGAAATC TTCCATGGCG
GCTATTTCGC CGGGCAGCAG AATCGTCCAC TACGACTCTC TCATCAGAGG AGCACAGGAG
GCGTATTCCG AGTTCCTGAA AAAGAGCAAG CAGCTCGACA AGCTGGAAAG AATCGTCGAC
AGGATATGA
 
Protein sequence
MNEGIGTTGM AGNDHYRMTV DLNVLDHLGI NLYSNIAAVL TEAVANAWDA DAENVEIGID 
PDGKFIEIKD DGIGMSIEDM NTKYLRVGYR RRDEDQETGR TTAKGRPVMG RKGLGKLSLF
SIANTIEVHS AKNGESHGLR MTIDGIHKSV QDKEPFYSPE KLPREEIQVT NGTAILLKDI
KRQRLGRGAT ALRKRLARRF SVVGEAHGFK ILIDGHPIST ADRGDLPMVQ FLWSFGDEEP
DLSSAGQLLE REALSDRLDA WDGDWSVTGW IGTARLPKQL DSDDAGNLNS IVVFARGRLF
HENILDKLND GRLYTKYLTG QIEADFLDAD DEPDIATSDR QRVQEDDPRY VQLIAFLRKQ
LTQVEKRWTE WRRLHEVEKA KETSPALAEW LESLPEGFRK SAETLIAKLS ALPVDQDEDR
KLMYRHGILA FERMKLRGSA EELAAHVHDI DKLLAILADR DSLEASLYRD IVKSRLDAIK
DFQGIADDNA KESVLQKYLF DHLWLLDPAW ERATASEVME TRLTTDGVLT QDMTEKERLG
RVDIAYRTMA GKHIIVELKR VKRKMKLLEL QEQGQTYVDK LKKILLAQGD ATPNIEVVFV
LGEPIDEEGS NPERLKSSMA AISPGSRIVH YDSLIRGAQE AYSEFLKKSK QLDKLERIVD
RI