Gene Sfum_3842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3842 
Symbol 
ID4457837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4687730 
End bp4688527 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content65% 
IMG OID639704615 
Productglutamine amidotransferase, class-II 
Protein accessionYP_847946 
Protein GI116751259 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.182398 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGGAC AAGTAGGCAT CATCTTCGGC CGCAAGCGCA GACGGCCGGA CGAGCGGGAT 
TACCTGCGCG AGGTCTTCAT CCGCATGCTG CTGCACAGCG AGGAGCGCGG CCCGCACGCC
TCCGGTCTGG CCTGGCTCAA GACCGACGGC AGCCACCGCA TCTTCAAGCG GCCGATGCGG
GCGCACGAGC TGGTCTACGA GAAGCCGTTC CAGGAGCTGC TCGGGCAGGT CGACAACAAG
ACCTCCATCC TCATGGGCCA CACCCGCTGG CGCACCCGGG GCAACGAGTT CAACAACCGC
AACAACCATC CCATCCGGGC CGGGATCGTC ATCGGCACCC ACAACGGCAC CATCTACAAC
GCCGACCACC TGTTCCGCCG TCTCGGACTG CCGCGCTACG CCGAGGTGGA CAGCGAGCTG
ATCTTCCGCC TGGCCGACCG TTTCGCGCCC GAAGGCCCCA TCGACCAGGA GTGCCTGAAG
AAGGCGCTTG CCCTCTGTCG CGGCCAGATG AGCGCCGTGC TGGCATCAAA GCTCGACCCC
GGCACCATCG CCGTGCTCAA GGGCAACAAG CCGCTCTGCC TGCGCATCCA CCGCCAGCAC
CGGGTGGTGC TCTACGCCTC GGACGACGCC TTTATCGACT TTGCCGTGGA CAACGAGAAG
GGCTGGCGCG AGCTGGAAGT GCCGCCCATG ACCATGCTCA CCATCCGCCA CGAGGATGTG
CGGGCCATCA AGAACAGCGA ATTCCGCTTC ATACCCCAGG AGCGCAAAGG GACACTGCCC
GAAGGAGTGA ATGCATGA
 
Protein sequence
MCGQVGIIFG RKRRRPDERD YLREVFIRML LHSEERGPHA SGLAWLKTDG SHRIFKRPMR 
AHELVYEKPF QELLGQVDNK TSILMGHTRW RTRGNEFNNR NNHPIRAGIV IGTHNGTIYN
ADHLFRRLGL PRYAEVDSEL IFRLADRFAP EGPIDQECLK KALALCRGQM SAVLASKLDP
GTIAVLKGNK PLCLRIHRQH RVVLYASDDA FIDFAVDNEK GWRELEVPPM TMLTIRHEDV
RAIKNSEFRF IPQERKGTLP EGVNA