Gene Sfum_3840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3840 
Symbol 
ID4457835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4686250 
End bp4687212 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content65% 
IMG OID639704613 
Producthypothetical protein 
Protein accessionYP_847944 
Protein GI116751257 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.332695 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGA AAGAGATCCA CTACGGGATC GAGATCGAGA CCGTAAAACG CACCCGGGAA 
CAGATCGCCT GGGCCATCCA CTCGGTGGTG GGCGGCACGG TCCGCCATGT CGGCATCCCC
AGCAGCTATG ACCCCTGGGA GGTCGAGGAC CTGCGCGGCC GCGTCTGGAA GGTGGTGGGG
GACGCCTCCC TGACCAGCGT CCCGGCCCAT CTGCGGGCCG AGGTGATCAG CCCGGTGCTC
AGCTACGACG ACATCCCGCA ACTGCAGGAG GCGGTCCGGG CCATCCGCCG CGCCGGAGGC
AAGATCAACA GCCAGTGCGG CATTCACATC CATATCGACG CCGCACCCTT CGACGGCAGG
CACTTGGGGA ACCTGGCCAA GATCATCTAC AAGCAGGAAC CGCTGATTCT CCACGCCCTC
GGCATCAGCC GCGACCGGCT CAACCGCTAC ACCCGGCCGG TCAGCGACGA GCTGATCCAA
CGCATCGAAC AGCATCGCCC GCGCACCAAG GACCAGCTCA ACCGCATCTG GTACGGCTAC
CACAACCGCC AGCCCCAGCA CTACGACAAC AGCCGCTACC ACGGGGTCAA CCTGCACAAC
GTCTGGTATC GGGGCACGGT GGAGTTCCGC TGGTTCGAGG CGACCCTCCA CGCGGGACGG
ATCAAGGCCT ACCTGCAGTT CTGCCTCGCC GTCGCCGCCA AGGCGCTCAA CGGCCGGGCA
GCCTCCAGCC GCAAGCGGGA TTTCGATCCC CAGAGCGCCA AGTACGACTT CCGGGTCTTC
CTGCTCCACC TCGGCCTGAT CGGCGACGAG TTCAAGACCG CCCGCAAGCA TCTGATGGCC
AACATGCCCG GCGACGCCGC CTTCAAGAAC GGACGGCCCA AACCGGAGGA CGTTCTGCCG
GACGAAACCG AAACCACCAC TCTCACCAAC GAGGCCGGGC AAGTTCCCGG CCTCACTGTT
TAA
 
Protein sequence
MNLKEIHYGI EIETVKRTRE QIAWAIHSVV GGTVRHVGIP SSYDPWEVED LRGRVWKVVG 
DASLTSVPAH LRAEVISPVL SYDDIPQLQE AVRAIRRAGG KINSQCGIHI HIDAAPFDGR
HLGNLAKIIY KQEPLILHAL GISRDRLNRY TRPVSDELIQ RIEQHRPRTK DQLNRIWYGY
HNRQPQHYDN SRYHGVNLHN VWYRGTVEFR WFEATLHAGR IKAYLQFCLA VAAKALNGRA
ASSRKRDFDP QSAKYDFRVF LLHLGLIGDE FKTARKHLMA NMPGDAAFKN GRPKPEDVLP
DETETTTLTN EAGQVPGLTV