Gene Sfum_3822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3822 
Symbol 
ID4457852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4669431 
End bp4670714 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content62% 
IMG OID639704595 
Productphage protein D-like 
Protein accessionYP_847926 
Protein GI116751239 
COG category[R] General function prediction only 
COG ID[COG3500] Phage protein D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTGG ATACCTTCAA ACCGACATTT CTGATTCAGA TCGAGGGGCA AGACCTCTCG 
AAGGACATCA CCCAGGAGAT CACCTCGTTC GTCTTCACCG ACAACGAGGA AGAGCTGGAT
GTTCTCGAGC TGTCGGTGAC CGACCGCAAC CTGCAGTTCG TCGACGATCC GCTGTTCCAG
GAAGGCAACG AGATCGTGGC CCGCTTCGGC TACGTGGGAA ACCTCTCCCC GCGCAAGAAG
GCGGTCATCA AGGACATCGA TTACGATTTT CCGGAAAACG GTGATCCGAC CATCCGCATC
AAGGCCTACG ACAAGGGCTT CAAACTGGCG GGCAAGGAAA ACCAGAAGGT CTGGCAGAAA
CCCGCTCCCG GCATCCTCTA TTCGGAAATC GCCGAACAAG TCGCCGCAGC CAACGGCTTC
ACGCCGGTGG TCACGGCCAC CAAGGGGACC CATCTCCGCG TCACCCAGAG CAACATCTCG
GACGCCCAGT TCCTCAAGGA GCTGGCGGAA AAGGCCCGTG ACCGCGATGG CGAGGGCGTG
AGCGGCTATG TCTTCTACAT CCAGGACGAC GAACTCCATT TCCATCCCCG CGAGCTCGAC
CAGACGCCGC TTCTGACCCT CGAATATTTC ACCGACACCA AGGGCCTGTT GCGCTCGTTC
CGCCCCAGCA CCCAATCCCA GGGAGCTAAG GGCGCGGGTG TCGAGACCAA GACGGTCGGC
GTCGACCCGC GCAAGAAGGA CGTGGTCGAG CACAAGGCCA ACAACGCCAC CACGGCCGAG
CGGACCGCCC TGGGCAAGCA GACCTATCTG GTCGACGGCA ACACCGGCGA AGGCAGCTTC
AAGGAACAGG AGACGGGGCA GATCGTGCCC AGCTTCGACC GTGCCGAAGG CTTTCACGAA
GAGCCGCGCC AGGAGCCTGC CCAGGACAGC GCCGAGGGCA AGTTCCGCGA GGCCGAGCTG
CGCCAGGTCG AGGCGGACGC CGCCACCATC GGCATTCCCC AGCTACGCGC CAAGAAGAAC
ATCGAGATCA AGGGCGTGGG CCGGAAGTTT TCCGGCATCT ACTACTGCCA CTCGGTGCGC
CACAGCATCA GCGGCGCAGG CTATCTCTGC GAACTCAAAC TCAAGAAGAA CGCCCTCGGC
AAGGGCGCGG GCGACAAGTC CGCCGAGTCC CAGGGCAAAC CCAACGACAA GGAGGCCCCG
CCCACGCCGC AAAACGAGCC GCCAGCCATG GTGACCATCG ACGCGGACTC CGGCGCGGTC
ACACAAGGAG GCGGCAATGG GTGA
 
Protein sequence
MDLDTFKPTF LIQIEGQDLS KDITQEITSF VFTDNEEELD VLELSVTDRN LQFVDDPLFQ 
EGNEIVARFG YVGNLSPRKK AVIKDIDYDF PENGDPTIRI KAYDKGFKLA GKENQKVWQK
PAPGILYSEI AEQVAAANGF TPVVTATKGT HLRVTQSNIS DAQFLKELAE KARDRDGEGV
SGYVFYIQDD ELHFHPRELD QTPLLTLEYF TDTKGLLRSF RPSTQSQGAK GAGVETKTVG
VDPRKKDVVE HKANNATTAE RTALGKQTYL VDGNTGEGSF KEQETGQIVP SFDRAEGFHE
EPRQEPAQDS AEGKFREAEL RQVEADAATI GIPQLRAKKN IEIKGVGRKF SGIYYCHSVR
HSISGAGYLC ELKLKKNALG KGAGDKSAES QGKPNDKEAP PTPQNEPPAM VTIDADSGAV
TQGGGNG